Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00227 ATGGCTTCTGCTAATGATTTGACAGAGACAGAGAGGAGCACAGCAAAGAGCCTTAGACATGTGGGGAGAAAGCTCCTCAAGTGCTCTTCGGTTCACAAGCTTCTGCAACTCCTTGATAAATTGGAGCTGCTATTATCATCCCTGGATCAAGAACCAACTAAGCCAATTCAAGAATCACTTGTACCTGCAATGAAGGCATTGATTTCCGATGAACTTTTGAGGCACACAGATGGGGATGTTAAGATTTCAGTTACATCTTGCATCAATGAGATTACAAGAATCACTGCACCAGATGTCCCTTATGATGATGAACAAATGAAGGAAATATTCAAGCTCACAGTGGCATCTTTTGAGAAATTGTCTCACATATCTGGCCGTGGCTATGAAAAAGCACTTACCATACTCGATAATGCCAATAAAGTCAGATTATGCTTGGTCATGCTGGACCTTGAGTGTAATGACCTGGTTATTGAAATGTTTCAGCATTTCTTGAGATATATAAGGTCAGACCATCCCTGTAATGCAATTCATTCAATGGAACCAATAATGACCCTGATTTTGCAAGAAATTGAACAAATTTCCCCAGCTCTTCTTAGACCTCTGTTGGATAGCGTAGGGAATGAAAATCAGATTATTTCACCTATGTCTTGGTCATTGGGGGAGAAAGTAATTAGCAACTGTGCTGTTAATCTCAAGCCTTATCTCATGAAGGCGGTGGAGTCCTCAGGCAGAGCTCTAAATGAGTATGCACAGATACTAACTGATATTTGCCAGAACCAATCTGAATCCCCTCAGTGTGATGATTCAAATGGTTCTAAGAAGACAGTGgttcaggaagctgagaacaagcttgatgttcctaaagatgcagaggaacaatcatgtgatgttcaggaagctcagaacaagcttgatgtttctaaagaggcagaggaacaaccgtgtgatgttcaggaagctgagaacaagcttgatgctcctaaagatgcaaaggaacaaccatgtgatgttcaggaagctgagaacaaacttaatgttcctaaagatgcagaggaacaaccagttgatGAAACCAAGGGGCATGAACTGGATATTACTGGTGAGAGAGATGTCCAAATTTTGGATGATACAAAGTCAAACATAAGAAGTGGTACTTCTGCCATGGATGGTGAATCGATAAACATATCTGGTTCAAAAAGGAGACCACATTCTGCAATAACTAAGAACTCCAAAAGAGGAAGTGCAAAAGCCAATTTGGAAACTGACAATTTAGAGTCTGTTCAGGAACCAAAATCAGAAATGCAGTTGAATACTGTGCCAAGGAAGAGGGGCCGTAAGCCTAATTCTTTACTGAATGCAgaggaaggctatgatcactcatggatttatcaagaaagaaaacctgggaaatcagctctatccaggaaggcttgcaattgcagttctccatatccatcttctgaaaaacctacttccagaaaggataagttgcatcggaagcctaaaactgtaagtgaaactctagtttctatgttgaaaagtgagaacatagcaaaacctgcccaatccagaaggactcaaaatattggcagtgattttccagctaatgatacaagtgaacctaaacataaaactgatgagaatacggatgctgctcctgtaaataataacattcctgatggacgtcatatcAAATGCGGTCAGCCAAGGAAAATAAATAACACTGGGAATCAAGATGTTCATTCCAATTCTCTGTCAATATTAAAGGAAGACAACTTGAATTCTCTTCTTGAGAAGACTTCTCTGGATTCCCCAGCAGTTAGGTTGGAAAAGGAATCTGAAGTAAGGAAGGATTCTGAAATAAAACCCATTAGGAAAATCAAATTTTCTGTAAGGGTTGATGGGAAACTTGTGGCTCCAGAATCAGTTGCTAAGAGGGAACCTAGCGCTTCTTGTGGATATGAGGGGAAACACAAGTCATTTGTGAATATTGAGCTAGAAAATATAGAAGAGAGCAGATCCTCAGCTCAAACAGATGTTAAGAAAAGGAGGAGGCTTAATGCTACTCCTAATAAGGGTGTCAACAAATCATCAGCTGTGAAGGAGCTGATTGTAGAATCTGCAAGTAAAACGTTAGGTGGTGTCAAGGAAACCCCACAAGCAAGTTTGAGGAGGAGACACATTACTGCGAATGTAGAGGCATCTGAATCTTGTGATGATGGTAGCTCATTGGTTTGTAGAAGGATCAAGGTCTGGTGGCCAAAGGATAAGATGTTTTATGAAGGTGTTATTGATTCTTATGATCCTATCAAAGGAAAGCACAAGATTTTGTATGCCGATGGTGATGTTGAAGTGTTGAACCTCAAAAGACAGCGTTGGGAACCAGTTACTGTTGATGTTTTGTTACATGAGGAAGGACTTGCACATCAGAGGCATGCACAAGCATCAGACATAGCAGAAAATGGCAAGGAAAAATCCGCATTGGAGTCAGCCAAGGGTGCAAATATAAATTCTCAGTCCAGTAGGGGAAGAGCTTCAGCTTCTGCAGGCATCTTCAAATCTGTGAAATCTGCGGATACTTCTGCTGTTGATTTGGCTGATGATTCACCTATCATTTTTAGCAGAAAAGACTCTAGGACACCTAAAACCAAAAGAAGAAGGGTGTAA 2667 0.3198 MASANDLTETERSTAKSLRHVGRKLLKCSSVHKLLQLLDKLELLLSSLDQEPTKPIQESLVPAMKALISDELLRHTDGDVKISVTSCINEITRITAPDVPYDDEQMKEIFKLTVASFEKLSHISGRGYEKALTILDNANKVRLCLVMLDLECNDLVIEMFQHFLRYIRSDHPCNAIHSMEPIMTLILQEIEQISPALLRPLLDSVGNENQIISPMSWSLGEKVISNCAVNLKPYLMKAVESSGRALNEYAQILTDICQNQSESPQCDDSNGSKKTVVQEAENKLDVPKDAEEQSCDVQEAQNKLDVSKEAEEQPCDVQEAENKLDAPKDAKEQPCDVQEAENKLNVPKDAEEQPVDETKGHELDITGERDVQILDDTKSNIRSGTSAMDGESINISGSKRRPHSAITKNSKRGSAKANLETDNLESVQEPKSEMQLNTVPRKRGRKPNSLLNAEEGYDHSWIYQERKPGKSALSRKACNCSSPYPSSEKPTSRKDKLHRKPKTVSETLVSMLKSENIAKPAQSRRTQNIGSDFPANDTSEPKHKTDENTDAAPVNNNIPDGRHIKCGQPRKINNTGNQDVHSNSLSILKEDNLNSLLEKTSLDSPAVRLEKESEVRKDSEIKPIRKIKFSVRVDGKLVAPESVAKREPSASCGYEGKHKSFVNIELENIEESRSSAQTDVKKRRRLNATPNKGVNKSSAVKELIVESASKTLGGVKETPQASLRRRHITANVEASESCDDGSSLVCRRIKVWWPKDKMFYEGVIDSYDPIKGKHKILYADGDVEVLNLKRQRWEPVTVDVLLHEEGLAHQRHAQASDIAENGKEKSALESAKGANINSQSSRGRASASAGIFKSVKSADTSAVDLADDSPIIFSRKDSRTPKTKRRRV 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00227 888 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 15 873 IPR039776 GO:0007064
Gma07g00227 888 MobiDBLite consensus disorder prediction 811 827 - -
Gma07g00227 888 MobiDBLite consensus disorder prediction 377 435 - -
Gma07g00227 888 Coils Coil 290 310 - -
Gma07g00227 888 MobiDBLite consensus disorder prediction 283 376 - -
Gma07g00227 888 MobiDBLite consensus disorder prediction 811 849 - -
Gma07g00227 888 MobiDBLite consensus disorder prediction 831 847 - -
Gma07g00227 888 MobiDBLite consensus disorder prediction 283 563 - -
Gma07g00227 888 MobiDBLite consensus disorder prediction 489 503 - -
Gma07g00227 888 Coils Coil 31 51 - -
Gma07g00227 888 PANTHER SISTER CHROMATID COHESION PDS5-LIKE PROTEIN 15 873 - -
Gma07g00227 888 MobiDBLite consensus disorder prediction 507 535 - -
Gma07g00227 888 Pfam Sister chromatid cohesion protein PDS5 protein 33 236 - -
Gma07g00227 888 Gene3D - 745 793 - -
Gma07g00227 888 SUPERFAMILY Tudor/PWWP/MBT 743 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00227 Gma-Chr7 1867297 1878315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00227 - - gmx:100812058 1723.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00227 07 1867297 1878315 Gma08g02001 08 18004904 18018997 GST