Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01990 ATGCGACGCTCTTCTGCATCCAAAAAGACGGGTCAATCCAATTCCACCCCCATCGCCGCCGATCTCTTCCGCTCCGCTTCAAGTAAGGCAAGCTCGAAGGAATCAGAGCGAATTGATAGTCTATTCTATTCGTATGCCAATGGGTCTACTGGGTTGATTGACCCAGAAGGAATTGAAACACTTTGTGCTGATATGGAGGTGGACCATACAGATGTGAGGGTTTTGATGCTTGCGTGGAAAATGAAAGCTGAGGAGCAAGGATATTTTACCTTGGATGAGTGGAGGAGAGGCTTAAAAGCATTAAGGGCCGATACTGTAAGTAAATTGAAGAAGGCACTCCCAGACCTAGAAAAAGAGGTCAGGAGGCCATCAAACTTTGCAGATTTCTATTCTTATGCTTTCCAATATTGTTTAACAGAGGAGAAACAGAAAAGCATTGATATAGAGAGCATTTGTGAGTTACTTACTCTTGTTTTGGGTTCAACATTTCCAGCCCAAGTCAACTTGTTTGTGGAATATTTGAAGACTCAAAATGATTACAAGGTCATAAACATGGATCAATGGATGGGATTTTTCCGCTTTTGCAATGAGATAAGTTTTCCAACCCTTAATGACTATGATTCTGAACTTGCCTGGCCCTTGATCTTGGATAACTTCGTTGAATGGCTGCGAGAAAAACAAAAATAA 687 0.4178 MRRSSASKKTGQSNSTPIAADLFRSASSKASSKESERIDSLFYSYANGSTGLIDPEGIETLCADMEVDHTDVRVLMLAWKMKAEEQGYFTLDEWRRGLKALRADTVSKLKKALPDLEKEVRRPSNFADFYSYAFQYCLTEEKQKSIDIESICELLTLVLGSTFPAQVNLFVEYLKTQNDYKVINMDQWMGFFRFCNEISFPTLNDYDSELAWPLILDNFVEWLREKQK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01990 228 Gene3D Cullin, PONY binding domain 123 228 IPR042460 -
Gma08g01990 228 Pfam Cullin binding 108 222 IPR005176 -
Gma08g01990 228 ProSiteProfiles DCUN1 domain profile. 33 224 IPR005176 -
Gma08g01990 228 PANTHER RP42 RELATED 1 227 IPR014764 -
Gma08g01990 228 Gene3D - 31 121 - -
Gma08g01990 228 SUPERFAMILY EF-hand 25 194 IPR011992 -
Gma08g01990 228 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01990 Gma-Chr8 17907222 17911961 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01990 K17824 - gmx:100499856 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01990 08 17907222 17911961 Gma08g01990 08 17907222 17911961 ECH
Gma07g00239 07 2045134 2049502 Gma08g01990 08 17907222 17911961 GST