Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00239 ATGGGCACCACAATTATAAAGCCCCACTTCAGCGCATCCACGTCATCATCCTCAACCTCAACCTCTCCGAGCCAGCGAGCGAGAACCAGACTCAAGAAGAAAACGTGTTGTATGCGACGCTCTTCTGCATCCAAAAAGTCGGGTCAATCCAATTCCACTCCCAACGCCGCCGATCTCTTCCGCTCTGCTTCAAGTAAGGCAAGCTCGAAGGAATCAGAACGAATTGATAGTCTATTCTATTCATATGCCAATGGGTCTACCGGGTTGATTGACCCAGAAGGAATCGAAACACTTTGTGCTGATATGGAGGTGGATCATACAGATGTGAGGGTTTTGATGCTTGCATGGAAAATGAAAGCTGAGGAGCAAGGATATTTTACCTTGGATGAGTGGAGGAGAGGCTTAAAAGCATTAAGGGCCGATACAGTAAGTAAATTGAAGAAGGCACTTCCAGACCTAGAAAAAGAGGTCAGGAGGCCATCGAACTTCACAGATTTCTATTCTTATGCTTTCCAATATTGTTTAACAGAGGAGAAACAGAAAAGCATTGATATAGAGAGCATTTGTGAGTTACTTACTCTTGTTTTGGGTTCAACATTTCCAGCCCAAGTCAACTTGTTTGTGGAATATTTGAAGGCTCAAAATGATTACAAGGTCATAAACATGGATCAATGGATGGGATTTTTCCGTTTTTGCAATGAGATAAGTTTTCCAACCCTCAATGACTATGATCCTGAACTTGCCTGGCCCTTGATCCTGGATAATTTCGTTGAATGGCTGCGAGAAAAGCAAAAATAG 798 0.4311 MGTTIIKPHFSASTSSSSTSTSPSQRARTRLKKKTCCMRRSSASKKSGQSNSTPNAADLFRSASSKASSKESERIDSLFYSYANGSTGLIDPEGIETLCADMEVDHTDVRVLMLAWKMKAEEQGYFTLDEWRRGLKALRADTVSKLKKALPDLEKEVRRPSNFTDFYSYAFQYCLTEEKQKSIDIESICELLTLVLGSTFPAQVNLFVEYLKAQNDYKVINMDQWMGFFRFCNEISFPTLNDYDPELAWPLILDNFVEWLREKQK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00239 265 PANTHER RP42 RELATED 38 264 IPR014764 -
Gma07g00239 265 MobiDBLite consensus disorder prediction 41 64 - -
Gma07g00239 265 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 38 264 - -
Gma07g00239 265 MobiDBLite consensus disorder prediction 1 26 - -
Gma07g00239 265 Gene3D - 68 158 - -
Gma07g00239 265 Pfam Cullin binding 145 259 IPR005176 -
Gma07g00239 265 ProSiteProfiles DCUN1 domain profile. 70 261 IPR005176 -
Gma07g00239 265 SUPERFAMILY EF-hand 62 232 IPR011992 -
Gma07g00239 265 MobiDBLite consensus disorder prediction 1 64 - -
Gma07g00239 265 Gene3D Cullin, PONY binding domain 160 265 IPR042460 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00239 Gma-Chr7 2045134 2049502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00239 K17824 - gmx:100776788 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00239 07 2045134 2049502 Gma08g01990 08 17907222 17911961 GST