Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01968 ATGTCCCCACCCACCACTCTTTTTCTCGCACTCACTCCCAAGTTTTCAAGTTCACCTGCAACAGCAACACGAGAGCCACTCAGTGATCGCTTCTCTTCTTCTTCATCTTACAGTGTCAGGATGGGGGGAGCATGTTCTAGGAAGCAAGAGTGGGATAACGAAGATAGTCTTATCAGAGGACTACCACGAAGATATTGCAAATGCGGAAGTTTGAAATGGTGGACATCCTCTTTTTCTTATCCATCTGTAGATTTTCACCTACGAAAAGGAGAATGTCCATCACTGTTGGACTTATGCATACAGAAAATAAGCGAGGATATTGATAAATATAACACATTTTCTATGCTACCACGAGATATAAGTCAGCTAATTTTCAATAATTTGGTTTACTCCCGATGTCTAACCAGTGCTTCCCTTGAAGCTTTTCGAGATTGTGCTCTCCAGGATCTTTACTTGGGAGAATATGATGGTGTTAATGATAATTGGATGGGCGTCATCTCATCCCAGGGTTCATCTTTACTTTCTGTGGATCTTTCTGGGTCTGATGTCACTGATTTTGGGCTGACATACCTTAAAGATTGTGAAAGTCTCATTTCCTTAAATCTAAATTACTGTGACCAAATTTCAGATCGTGGACTAGAGTGTATCAATGGTCTGTCAAACTTGACAAGTTTGAGTTTCAGAAGAAATGATTCAATTTCTGCTCAAGGAATGAGTTCCTTTTCCGGTCTTGTTAACTTGGTCAAGTTGGATTTGGAGAGATGTCCCGGGATTCATGGAGGCCTTGTTCATCTTCGAGGTTTGACCAAGTTGGAATCTCTCAATTTGAAGTGGTGTAACTGCATAAAAGATTATGATATGAAACCTCTTTCAGAGCTTGCAAGCCTGAAAAGTCTAGAGATTTCTTCCAGTGACGTCACTGATTTTGGCATCAGTTTTCTAAAAGGGTTACAGAAGCTTGCCCTTTTAAATTTGGAAGGGTGCCTTGTAACAGCTGCATGCTTGGATTCTCTTGCAGAGCTTCCTGCACTGTCAAACTTGAATCTTAATAGATGCCTTCTCTCTGACAATGGATGCAAAAAATTTTCACGACTCGAAAATTTGAAAATATTAAACTTGGGATTTAATGTCATAACAGATGCATGTTTAGTTCACTTGAAAGCAGGATTGACAAAGTTGGAGAGCTTGAACCTTGATTCTTGTAAGATTGGTGATGAAGGATTGGTCAATTTGGCTGGCCATAAACAATTGAACTGCTTGGAATTGTCGGATACAGAAGTTGGAAGCAATGGGCTACACCATTTATCAGGATTGTCTAGTCTGCAGAAAATAAATCTGTCTTTTACCATGATTAGTGATAGTAGTTTAAGGAAATTGTGCGGACTCTCATCTCTGAAGTCACTTAATTTGGATGCTTACCAAATTACTGATGCTGGGCTGGCAAACCTTACAAGTTTGACTGGCCTCACTGACCTGGATTTGTTTGGTGCACGAATCACAGATTTTGGGACAAACTATTTGAAAAAATTTAAGAACCTGAGGTCCTTGGAAATATGCGGTGGAGGATTGACTGATACTGGTGTGAAAAATATTAAAGAGCTTTCTTCTCTAGTGTGCTTAAATTTATCACAAAACAGCAACCTTACAGACAAAACCCTGGAGTTAATTTCTGGGCTTACTGGGTTGGTTTCTTTGAATGTTTCAAATTCTCGTATCACTAATGCTGGACTGCAGCATTTGAAGACACTGAAGAACTTGAGATCTCTGACATTGGAGTCCTGTAAGGTGACAGCAAATGACATCAAGAAACTGAAATCAATGTACCTCCCAAATTTGGTAAGCTTTCGGCCTGGGTAG 1857 0.3996 MSPPTTLFLALTPKFSSSPATATREPLSDRFSSSSSYSVRMGGACSRKQEWDNEDSLIRGLPRRYCKCGSLKWWTSSFSYPSVDFHLRKGECPSLLDLCIQKISEDIDKYNTFSMLPRDISQLIFNNLVYSRCLTSASLEAFRDCALQDLYLGEYDGVNDNWMGVISSQGSSLLSVDLSGSDVTDFGLTYLKDCESLISLNLNYCDQISDRGLECINGLSNLTSLSFRRNDSISAQGMSSFSGLVNLVKLDLERCPGIHGGLVHLRGLTKLESLNLKWCNCIKDYDMKPLSELASLKSLEISSSDVTDFGISFLKGLQKLALLNLEGCLVTAACLDSLAELPALSNLNLNRCLLSDNGCKKFSRLENLKILNLGFNVITDACLVHLKAGLTKLESLNLDSCKIGDEGLVNLAGHKQLNCLELSDTEVGSNGLHHLSGLSSLQKINLSFTMISDSSLRKLCGLSSLKSLNLDAYQITDAGLANLTSLTGLTDLDLFGARITDFGTNYLKKFKNLRSLEICGGGLTDTGVKNIKELSSLVCLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRITNAGLQHLKTLKNLRSLTLESCKVTANDIKKLKSMYLPNLVSFRPG 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01968 618 PANTHER UNCHARACTERIZED 42 574 - -
Gma08g01968 618 SUPERFAMILY RNI-like 313 607 - -
Gma08g01968 618 Gene3D Ribonuclease Inhibitor 260 337 IPR032675 -
Gma08g01968 618 Gene3D Ribonuclease Inhibitor 162 259 IPR032675 -
Gma08g01968 618 Gene3D Ribonuclease Inhibitor 338 445 IPR032675 -
Gma08g01968 618 Gene3D Ribonuclease Inhibitor 521 613 IPR032675 -
Gma08g01968 618 Gene3D Ribonuclease Inhibitor 446 520 IPR032675 -
Gma08g01968 618 PANTHER LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 4-LIKE 42 574 - -
Gma08g01968 618 Pfam Leucine Rich repeat 391 412 IPR001611 GO:0005515
Gma08g01968 618 Pfam Leucine Rich repeat 194 216 IPR001611 GO:0005515
Gma08g01968 618 Pfam Leucine Rich repeat 269 290 IPR001611 GO:0005515
Gma08g01968 618 Pfam Leucine Rich repeat 220 242 IPR001611 GO:0005515
Gma08g01968 618 Pfam Leucine Rich repeat 367 381 IPR001611 GO:0005515
Gma08g01968 618 SMART LRR_CC_2 341 365 IPR006553 -
Gma08g01968 618 SMART LRR_CC_2 510 534 IPR006553 -
Gma08g01968 618 SMART LRR_CC_2 194 219 IPR006553 -
Gma08g01968 618 SMART LRR_CC_2 268 293 IPR006553 -
Gma08g01968 618 SMART LRR_CC_2 462 486 IPR006553 -
Gma08g01968 618 SMART LRR_CC_2 390 414 IPR006553 -
Gma08g01968 618 SMART LRR_CC_2 559 583 IPR006553 -
Gma08g01968 618 SUPERFAMILY L domain-like 168 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01968 Gma-Chr8 17643433 17652423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01968 263 470 Receptor kinase-like Gene Family AT1G75820 25.359 5.29e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01968 - - gmx:100795219 1159.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01968 08 17643433 17652423 Gma08g01968 08 17643433 17652423 ECH
Gma07g00263 07 2308616 2317791 Gma08g01968 08 17643433 17652423 GST