Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00263 ATGGGGGGAGCGTGTTCTAGGAAGCAAGAGCGGGACAACAAAGATAGTCCTACCAGAGGACTATCACGAAGATATTGCAAAAGCGGGACTTTGAAATGGTGGACATCCTCTTTTTCTTATCCATCTGTAGATTTTCACCTACGAAAAGGAGAATGTCCACCACTGTTGGACTTGTGCATACAGAAAATAAATGAGGATATTGATAAATATAACACATTTTCTATGCTACCACGAGATATAAGTCAGCTAATTTTCAATAATTTGGTTTACTCCCGACGTCTAACCAGTGCTTCCCTTGAAGCTTTTCGAGATTGTGCTCTCCAGGATCTTTACTTGGGAGAGTATGATGGTGTTAATGATAATTGGATGGGTGTCATCTCATCCCAGGGTTCATCTTTGCTTTCTGTAGATCTTTCTGGGTCTGATGTCACTGATTTTGGGCTGACATACCTTAAAGATTGTGAAAGTCTCATTTCCTTAAATCTAAATTACTGTGACCAAATTTCAGATCGTGGACTAGAGTGTATCAGTGGTCTGTCAAACTTGACAAGTTTGAGTTTCAGAAGAAATGATTCAATTTCTGCTCAAGGAATGAGTGCCTTTTCTGGTCTTGTTAACTTGGTCAAGTTGGATTTGGAGAGATGTCCTGGGATTCATGGAGGCCTTGTTCATCTTCGAGGTTTGACCAAGTTGGAATCTCTCAATTTAAAGTGGTGTAATTGCATAACAGATTATGATATGAAACCTCTTTCAGAGCTTGCAAGCCTGAAAAGTCTAGAGATTTCTTCCAGTAAAGTCACTGATTTTGGCATCAGTTTTCTAAAAGGGTTACAGAAGCTTGCCCTTTTAAATTTGGAAGGGTGCCTTGTAACAGCTGCATGCTTGGATTCTCTTGCAGAGCTTCCTGCACTGTCAAACTTGAATCTTAATAGATGCAATCTCTCTGACAATGGATGCAAAAAAATTTCACgactggaaaatttgaaagtattaaacttgggatttaatgtcataacagatgcatgtttagttcacttgaaagGATTGACAAAGTTGGAGAGCTTGAACCTTGATTCGTGTAAGATTGGTGATGAAGGATTGGTCAATTTGGCTGGCCTTGAGCAATTGAACTGCTTGGAATTGTCCGATACAGAAGTTGGAAGCAATGGGCTACACCATTTATCAGGTTTGTCTAGTCTGCAGAAAATAAATCTGTCTTTTACCATGATTAGTGATAGCAGTTTAAGGAAATTGAGTGGACTCTCGTCTTTGAAGTCACTTAATTTGGATGCTTACCAAATTACTGATGCTGGGCTGGCAAACCTTACAAGTTTAACTGGCCTCACTGACCTAGATTTGTTTGGTGCACGAATCACAGATTTTGGGACAAACTATTTGAAAAAATTTAAGAACCTGAGGTCCTTGGAAATATGCGGTGGAGTATTGACTGATGCTGGTGTGAAAAATATCAAAGAGCTTTCTTCTCTAGTGTGCTTAAATTTATCTCAAAACAGCAACCTTACAGACAAAACCCTGGAGTTAATTTCTGGGCTTACTGGGTTGGTTTCTTTGAATGTTTCAAATTCTCGTATCACTAATGCTGGACTGCAGCATTTGAAAACACTGAAGAACTTGAGATCTCTGACATTGGAGTCCTGTAAGGTGACAGCAAATGACATCAAGAAACTGAAATCGATATACCTCCCTAATTTGGTAAGCTTTCGGCCAGGGTAG 1734 0.3818 MGGACSRKQERDNKDSPTRGLSRRYCKSGTLKWWTSSFSYPSVDFHLRKGECPPLLDLCIQKINEDIDKYNTFSMLPRDISQLIFNNLVYSRRLTSASLEAFRDCALQDLYLGEYDGVNDNWMGVISSQGSSLLSVDLSGSDVTDFGLTYLKDCESLISLNLNYCDQISDRGLECISGLSNLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGIHGGLVHLRGLTKLESLNLKWCNCITDYDMKPLSELASLKSLEISSSKVTDFGISFLKGLQKLALLNLEGCLVTAACLDSLAELPALSNLNLNRCNLSDNGCKKISRLENLKVLNLGFNVITDACLVHLKGLTKLESLNLDSCKIGDEGLVNLAGLEQLNCLELSDTEVGSNGLHHLSGLSSLQKINLSFTMISDSSLRKLSGLSSLKSLNLDAYQITDAGLANLTSLTGLTDLDLFGARITDFGTNYLKKFKNLRSLEICGGVLTDAGVKNIKELSSLVCLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRITNAGLQHLKTLKNLRSLTLESCKVTANDIKKLKSIYLPNLVSFRPG 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00263 577 Pfam Leucine Rich repeat 180 202 IPR001611 GO:0005515
Gma07g00263 577 Pfam Leucine Rich repeat 229 250 IPR001611 GO:0005515
Gma07g00263 577 Pfam Leucine Rich repeat 154 177 IPR001611 GO:0005515
Gma07g00263 577 SUPERFAMILY RNI-like 272 566 - -
Gma07g00263 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 4-LIKE 2 533 - -
Gma07g00263 577 SMART LRR_CC_2 518 542 IPR006553 -
Gma07g00263 577 SMART LRR_CC_2 228 253 IPR006553 -
Gma07g00263 577 SMART LRR_CC_2 301 325 IPR006553 -
Gma07g00263 577 SMART LRR_CC_2 469 493 IPR006553 -
Gma07g00263 577 SMART LRR_CC_2 421 445 IPR006553 -
Gma07g00263 577 SMART LRR_CC_2 154 179 IPR006553 -
Gma07g00263 577 SMART LRR_CC_2 349 373 IPR006553 -
Gma07g00263 577 MobiDBLite consensus disorder prediction 7 21 - -
Gma07g00263 577 MobiDBLite consensus disorder prediction 1 21 - -
Gma07g00263 577 Gene3D Ribonuclease Inhibitor 126 219 IPR032675 -
Gma07g00263 577 Gene3D Ribonuclease Inhibitor 480 572 IPR032675 -
Gma07g00263 577 Gene3D Ribonuclease Inhibitor 383 479 IPR032675 -
Gma07g00263 577 Gene3D Ribonuclease Inhibitor 220 292 IPR032675 -
Gma07g00263 577 SUPERFAMILY RNI-like 81 366 - -
Gma07g00263 577 Gene3D Ribonuclease Inhibitor 293 382 IPR032675 -
Gma07g00263 577 PANTHER UNCHARACTERIZED 2 533 - -
Gma07g00263 577 Pfam Leucine rich repeat 302 362 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00263 Gma-Chr7 2308616 2317791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00263 106 427 Receptor kinase-like Gene Family AT5G51350 26.888 1.32e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00263 - - gmx:100800666 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00263 07 2308616 2317791 Gma07g00263 07 2308616 2317791 ECH
Gma07g00263 07 2308616 2317791 Gma08g01968 08 17643433 17652423 GST