Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01946 ATGTTCTCTTCCTCAACTTCCTTCTTTCTTTGCCTTCTCCTCTTCTCTGTAACCTTTTGTCATGTTTTGGGGGATAAAGTATTTACAGGAACATATGGAGTAAACTACGGTAGGATAGCAGACAATCTACCTTCTCCTGAGAGTGTGGTTACTCTTCTGAAAGCTGCAAAGATTAGGAACATCAGAATATATGATGCTGATCGTCAAGTCCTGAATGCCTTCAAAGGGTCAGGGATTTCAATTAGTGTTTGTGTACCAAATGAGCTACTTAAAGAGATAAGTGTGGGAGAGGATCGTGCCATGAATTGGATCAAACAAAACGTTGAACCATATCTTCCAGGGACAAAAATCCGTGGCATTTCCATTGGGAATGAGATATTGGGAGGAGGAGATATGGAGCTTTGGGAAGCTTTGGTGCCTGCATCTAAAAATGTGTATTCTGCCCTTGCTAGGCTTAATTTGGCACATCAAATTCAGGTCTCAACTCCACATTCAGAGGCTGTGTTTGCAAATTCATACCCTCCATCTGCATGCACTTTTAGGGAGGATATTCTCCCTGTCATGAAGCCCCTCTTGCAATTCTTCTCACAAATTGGCACTCCTTTCTACATAAATGCATACCCTTTCTTGGCCTATAAGAATGATCCCCAACACATTGACATAAACTATGCTCTTTTCAAGAAAAACCCTGGGATTTATGATGCCAAGACAAAGCTACACTATGATAACATGTTTTTGGCCCAAGTTGATGCAGCATATGCTGCCTTGGACAAACTTGGGTTTGACAAGATGGAGGTCATTGTTTCCGAGACTGGTTGGGCCTCTAAAGGGGATGATAATGAAGCTGGGGCAACAGTGAAAAATGCAAGGACTTACAATAAAAATCTGCGTAAGTTACTGCTCAAGAAAAAGGGTACCCCTTATAGGCCCAAGATGGTAGTCAGGGCTTATATATTTGCTTTATTTAATGAGAATTTGAAGCCTGGCCCAACATCTGAGAGAAACTTTGGATTGTTCAAGCCAGATGGAAGCATTTCATATGATATAGGCTTTACTGGCCTTGTACCTTCCTCAGCAACCTCCCCTTTTCTTTCCTTCAAGGGTATTGGATCTTTATATGCAGTGGTTTCTACAAGTTGTGCGGCTTTTCTTATTCTTGTAGCATTATAA 1170 0.4137 MFSSSTSFFLCLLLFSVTFCHVLGDKVFTGTYGVNYGRIADNLPSPESVVTLLKAAKIRNIRIYDADRQVLNAFKGSGISISVCVPNELLKEISVGEDRAMNWIKQNVEPYLPGTKIRGISIGNEILGGGDMELWEALVPASKNVYSALARLNLAHQIQVSTPHSEAVFANSYPPSACTFREDILPVMKPLLQFFSQIGTPFYINAYPFLAYKNDPQHIDINYALFKKNPGIYDAKTKLHYDNMFLAQVDAAYAALDKLGFDKMEVIVSETGWASKGDDNEAGATVKNARTYNKNLRKLLLKKKGTPYRPKMVVRAYIFALFNENLKPGPTSERNFGLFKPDGSISYDIGFTGLVPSSATSPFLSFKGIGSLYAVVSTSCAAFLILVAL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01946 389 SUPERFAMILY (Trans)glycosidases 32 350 IPR017853 -
Gma08g01946 389 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 8 374 - -
Gma08g01946 389 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 374 IPR044965 GO:0004553|GO:0005975
Gma08g01946 389 Gene3D Glycosidases 31 354 - -
Gma08g01946 389 Pfam Glycosyl hydrolases family 17 33 351 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01946 Gma-Chr8 17440504 17442745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01946 28 360 Glycoside Hydrolase AT3G15800 75.749 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01946 - - gmx:113002394 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01946 08 17440504 17442745 Gma08g01946 08 17440504 17442745 ECH
Gma07g00283 07 2469037 2471778 Gma08g01946 08 17440504 17442745 GST
Gma13g03275 13 46728061 46729671 Gma08g01946 08 17440504 17442745 PCT
Gma15g00076 15 645109 646819 Gma08g01946 08 17440504 17442745 PCT
Gma08g01946 08 17440504 17442745 Gma13g03275 13 46728061 46729671 PCT
Gma08g01946 08 17440504 17442745 Gma15g00076 15 645109 646819 PCT