Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01927 ATGGCGTTGTTCTCTTCTGCCGCAACCGTTCTTCCTCGGAACCTGGCATTCACCAAACTCTCCCTCTCTCACTCTCACACTCTTCTACCGCGCTTCCTTTCTTTCCCAACTCCCAAGTCATCAAACCCTCGCAACCGCGTCGCAGTCTCTCTCCAAACCCCACGCGCTCAATCCGCCGCGTCCGCTTCTCCCTCCGCCTCCTTCCACGGCCTCTGCTACGTCGTCGGCGACAATATCGACACCGACCAGATCATTCCCGCCGAGTACCTCACCCTCGTCCCTTCCAAGCCCGACGAGTACGAGAAGCTCGGCTCCTACGCCCTCATCGGCCTCCCCGCCACCTACGCCACGCGTTTCATCGAACCCGGCGAGATCAAAACCAAGTACGCCATCGTCATCGGCGGTGCCAACTTCGGTTGCGGCTCCTCCCGCGAGCACGCCCCCGTCGCGCTGGGCGCCTCCGGCGCCGCCGCAGTGGTCGCGGAGTCGTACGCTAGGATCTTCTTTCGGAACTCCGTGGCCACCGGCGAGGTGTATCCGCTAGAGTCGGAGGGACGCCTCTGCGAGGAGTGCACCACCGGCGATGTGGTGACGATTGAGCTCGGAGAGAGCCGCTTGATCAATCACACCACCGGAAAGGAGTATCGCTTGAAACCGATCGGCGACGCGGGTCCAGTGATCGAGGCCGGTGGCATCTTTGCCTATGCCAGGAAAACCGGCATGATTCCCTCTCGTTGA 738 0.6179 MALFSSAATVLPRNLAFTKLSLSHSHTLLPRFLSFPTPKSSNPRNRVAVSLQTPRAQSAASASPSASFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALIGLPATYATRFIEPGEIKTKYAIVIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESEGRLCEECTTGDVVTIELGESRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARKTGMIPSR 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01927 245 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 6 244 - -
Gma08g01927 245 Gene3D Aconitase, domain 4 66 241 IPR015928 -
Gma08g01927 245 Pfam Aconitase C-terminal domain 130 176 IPR000573 -
Gma08g01927 245 SUPERFAMILY LeuD/IlvD-like 69 242 - -
Gma08g01927 245 CDD IPMI_Swivel 74 201 IPR033940 -
Gma08g01927 245 PANTHER BNAA05G34440D PROTEIN 6 244 - -
Gma08g01927 245 TIGRFAM LEUD_arch: 3-isopropylmalate dehydratase, small subunit 72 238 IPR011827 GO:0016836
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01927 Gma-Chr8 17318242 17320953 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01927 K01704 - gmx:100782688 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00299 07 2571080 2578374 Gma08g01927 08 17318242 17320953 GST