Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00299 ATGGCTTCTTCTAGTTCTAGGAGATGGGCTACCCTCATTTGCTCCATTGCCTTCTCAATATATTTCTTTATCATCATTTTTCAAGTTCCCATTTTCAGTGTTCCATGTAGATTTGGAATTTGTCATACTCCATTAGAAGTGACATCTTCTCAGTTAATTGCAAGTGAGGTCTTCCCTCTTTTTATCGTGAAGGCTCTTCTCTACCCTGGAGCTCTAGCAAAGGCAATTTGCAAGCTGAAAACCATCCAAAGCTACAGAAATCTGCTAAACTTGTACCAGTTCAATACAAGGGCAGTCTCTGCTGCATCAGATCTCCAACGCCTAGAGGTTCTGGCAGGAAGCTACTTGTCTGTGGGAGGAGCAATCACAGGTCTGATAAAACCAGGGAGAATGAGCCTTTTTGGAATACTACTTCTTATGTGGGGTCTGATTAGAGAGTCCATTATGGGAAAATCTGGTTTTGCTCATGCAAAAGGTATCCATATCTATCCAGCCATGTATATTGCACTAATCTCAGCATTCTTCTCCATTAGAAAGGATGTCCGAAAGATAATCCGTACTTTCACTCGAAAGCATGTTGTGAAGGCTAAACGTTATAAATCGAAGATTGGAAATGAGAAAATAGACGGAAGTGAGAGAGGAGGCACTGAGCATCCAACAATGGCCTTGTTCTCTGCTACCGCAACCGTTCTTCCTCGGAACCTCGCATTCGCTTCCTCCACCAAACTCTCCCTCTCTCACAGTCACTCTCTTCTACATCACTTCCTTTCATTCCCCACTCCCAAATCATCAAACCCTCGCAACCGGGTCGCAATCTCTCTCCAAACCCCACGCGCTCAATCCGGCGCGTCCGCCTCCGCCTCCTTCCATGGCCTCTGCTACGTCGTCGGCGACAACATCGACACCGATCAGATCATTCCCGCGGAGTACCTCACCCTCGTCCCTTCGAAGCCCGACGAGTACGAGAAGCTCGGCTCCTACGCCCTCGTCGGCCTCCCCGCCACCTACGCCGCGCGCTTCGTCGACCCCGGCGAGACCAAGACCAAGTACTCCATTGTCATTGGCGGCGCCAACTTCGGCTGCGGCTCCTCCCGCGAGCACGCTCCCGTGGCGCTGGGCGCTTCCGGCGCCGCCGCAGTGGTCGCGGAGTCGTACGCTAGGATCTTCTTCCGGAACTCCGTGGCCACCGGCGAGGTGTATCCGCTGGAATCGGAGGGACGCCTCTGCGAGGAGTGCACCACCGGCGATGTGGTAACGATTGAGCTCGGAGAGAGCCGTTTGATCAATCACACCACCGGAAAGGAGTATCGCTTGAAACCGATCGGCGACGCGGGTCCGGTGATCGAGGCCGGTGGCATCTTTGCCTATGCCAGGAAAACCGGCATGATTCCTTCTCGTTGA 1401 0.5218 MASSSSRRWATLICSIAFSIYFFIIIFQVPIFSVPCRFGICHTPLEVTSSQLIASEVFPLFIVKALLYPGALAKAICKLKTIQSYRNLLNLYQFNTRAVSAASDLQRLEVLAGSYLSVGGAITGLIKPGRMSLFGILLLMWGLIRESIMGKSGFAHAKGIHIYPAMYIALISAFFSIRKDVRKIIRTFTRKHVVKAKRYKSKIGNEKIDGSERGGTEHPTMALFSATATVLPRNLAFASSTKLSLSHSHSLLHHFLSFPTPKSSNPRNRVAISLQTPRAQSGASASASFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALVGLPATYAARFVDPGETKTKYSIVIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESEGRLCEECTTGDVVTIELGESRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARKTGMIPSR 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00299 466 Gene3D Aconitase, domain 4 286 462 IPR015928 -
Gma07g00299 466 SUPERFAMILY LeuD/IlvD-like 290 463 - -
Gma07g00299 466 Pfam Aconitase C-terminal domain 350 397 IPR000573 -
Gma07g00299 466 TIGRFAM LEUD_arch: 3-isopropylmalate dehydratase, small subunit 293 459 IPR011827 GO:0016836
Gma07g00299 466 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 274 465 - -
Gma07g00299 466 CDD IPMI_Swivel 295 422 IPR033940 -
Gma07g00299 466 PANTHER BNAA05G34440D PROTEIN 274 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00299 Gma-Chr7 2571080 2578374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00299 K01704 - gmx:100809737 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00299 07 2571080 2578374 Gma08g01928 08 17325244 17326026 ECH
Gma07g00299 07 2571080 2578374 Gma07g00299 07 2571080 2578374 ECH
Gma07g00299 07 2571080 2578374 Gma08g01927 08 17318242 17320953 GST