Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01889 ATGTTTCGGTGGCTATTGAAGCCCAGGTTCTATTCAAAATGCTTGTCTTACGTGAAGTTTATGAAGACTCGGCTAGAGATCATACAGAAGAAGAAGAAAGCAGAGCAGAAGTTTATGAAGAGTGACATCGCCGAGCTTCTTAGGAGTGGCCTTGACTATGATGCATATATAAGGGCTAAAGGACTTCTGTTGGAGCAAAATATGTTATCCTGCTATGAACTCATTGAAAAGTTTGTTGGATGCTTATCAGATCATGTTGAAGACCTAACTAAGCAGAAGGATTGCCCTGATGAGTGCAAGGAAGCTGTGTCATCATTGATGTATGCTGCTGCAAGATTTGCTGATCTGCCAGAATTGCGTGACCTCAGAACATTATTTACTGAGACATTTGGGAATTCTCTTGAACCATATATAAATAAAGAGTTTGTTGAGAAGCTGAGGCAAGATCCGCCTACGAGAGAAATGAAGATTGGACTATTATATGATATAGCACAAGAGTTCTCTGTAGAGTGGGACGACAATGCTCTGAGACAAAGACTTTATACAGAATCGTCATTATGTGAAGAGAGGCCTAATCCCAGGAGAGACTTGATCACATCCAAAGGAAAAGAAAGAGACACAGACACCCTACCTCTTGGAAGGAAAGATTTCAATGATGTCTCATTGATACACCAAAATAGTAGTGATGATGAAACAAGTACAGAACTGTCATCCCATGATGGCAGAAAGGGTAGTAGTTCAAATTCATTGGGAAGCTTTTCTGAGGATGAAGTAGAAACTAAGAGGCCAATTTCTTCCTATTTGCTCATTCCACCCCCATACCTCAAACAAAAGACCAACACAGGTGAAAGCAATTCAAAGAGAACAACACATTCTGAGGCTGCAGGCAAAGGAAAACGTTATCCTTCTCAACAACAAGAACATGATACTGGCGAAAACAGAAGGCTTAGAACATCACATGTCAGATGA 969 0.4056 MFRWLLKPRFYSKCLSYVKFMKTRLEIIQKKKKAEQKFMKSDIAELLRSGLDYDAYIRAKGLLLEQNMLSCYELIEKFVGCLSDHVEDLTKQKDCPDECKEAVSSLMYAAARFADLPELRDLRTLFTETFGNSLEPYINKEFVEKLRQDPPTREMKIGLLYDIAQEFSVEWDDNALRQRLYTESSLCEERPNPRRDLITSKGKERDTDTLPLGRKDFNDVSLIHQNSSDDETSTELSSHDGRKGSSSNSLGSFSEDEVETKRPISSYLLIPPPYLKQKTNTGESNSKRTTHSEAAGKGKRYPSQQQEHDTGENRRLRTSHVR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01889 322 MobiDBLite consensus disorder prediction 239 254 - -
Gma08g01889 322 MobiDBLite consensus disorder prediction 302 322 - -
Gma08g01889 322 PANTHER IST1 FAMILY MEMBER 9 300 IPR005061 GO:0015031
Gma08g01889 322 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 9 300 - -
Gma08g01889 322 MobiDBLite consensus disorder prediction 188 213 - -
Gma08g01889 322 MobiDBLite consensus disorder prediction 187 322 - -
Gma08g01889 322 Pfam Regulator of Vps4 activity in the MVB pathway 18 169 IPR005061 GO:0015031
Gma08g01889 322 Gene3D - 6 177 IPR042277 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01889 Gma-Chr8 16982603 16984714 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01889 - - gmx:100792068 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01889 08 16982603 16984714 Gma08g01889 08 16982603 16984714 ECH
Gma07g00053 07 435664 438195 Gma08g01889 08 16982603 16984714 GST