Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00053 ATGTTTCGGTGGCTATTGAAGCCCAGGTTCTATTCAAAATGCTTGTCCTACGTGAAGTTTATGAAGACTCGGCTAGAGATTATACAGAATAGGAAGAAAGCGGAGCAGAAGTTAATGAAGAGTGACATTGCCGAGCTTCTTAAGAGTGGCCTTGACTACGATGCATATATAAGGGCTGAACGGCTTCTGTTCGAGCAAAACATGTTGTCCTGCTATGAACTCGTTGAAAAGTTTGTAGGATGCATATCAGATCATGTTGAAGACCTAACTAAGCAGAAGGATTGCCCTGATGAATGCAAGGAAGCTGTGCCATCATTGATGTATGCTGCAGCAAGATTCGGTGATCTGCCAGAATTGCGTAACCTCAGAACATTATTTACTGAGAAATTTGGGAATTCTCTTGAACCTTGTATTAATAAAGAGTTTGTTGAGAAGCTGAGGCGAGATCCGCCTACGAGAGAAATGAAGATTGGACTACTATATGATATAGCACAAGAGTTCTCTGTAGAGTGGAATGACAATGCTCTGAGGCAAATACTTTATACACAATCGTCATTATGTGAAGAGAGGCCTAATCCCGGGGGAGACTTCAATACATCTAAAGGGAAAGAAAAAGACACAGACACCCTACCTCTTGGAAGGAAAGATTTCAATGATGACTCATTGATACACCAAAATAGTAGTGATGATGAAACAAGTACAGAGCTGTCATCCCATGATGGCAGAAAGGGTAGTAGTTCAAGTTCATTGGGAAGCTTTTCTGAGGATGAAGCTGAAACTAAGAGGCCAATTTCTTCCTATTGGATCATTCCACCCCCATACCTCAAACAAAAGACCAACACAGGTGAAAGCAATTCAAAGAAAACAACACATTCTGAGGCTGGTGGAATGAAATCAGGCAAAGGAAAACCTTATCCTTCTCAACAACCAGATCATGATACTGGCCAAAACAGAAGGCGTACAACATCACATGTCAGAGGAAAATCTCTTTCTTCTGAGCCAACAACTGCAGTGGAAACATCAAAGGGGCATACACGAACAATTTCCTTAGAATCAGGAATTCGCGGTGGTGGTTCATGGCGTGTGCATCCAAATCTACCCGATTATGATGATTTGAGAGCTCGTCTTTTAGCTCTCAGACAAAGATAA 1149 0.4169 MFRWLLKPRFYSKCLSYVKFMKTRLEIIQNRKKAEQKLMKSDIAELLKSGLDYDAYIRAERLLFEQNMLSCYELVEKFVGCISDHVEDLTKQKDCPDECKEAVPSLMYAAARFGDLPELRNLRTLFTEKFGNSLEPCINKEFVEKLRRDPPTREMKIGLLYDIAQEFSVEWNDNALRQILYTQSSLCEERPNPGGDFNTSKGKEKDTDTLPLGRKDFNDDSLIHQNSSDDETSTELSSHDGRKGSSSSSLGSFSEDEAETKRPISSYWIIPPPYLKQKTNTGESNSKKTTHSEAGGMKSGKGKPYPSQQPDHDTGQNRRRTTSHVRGKSLSSEPTTAVETSKGHTRTISLESGIRGGGSWRVHPNLPDYDDLRARLLALRQR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00053 382 MobiDBLite consensus disorder prediction 239 254 - -
Gma07g00053 382 MobiDBLite consensus disorder prediction 327 348 - -
Gma07g00053 382 MobiDBLite consensus disorder prediction 199 226 - -
Gma07g00053 382 Gene3D - 4 179 IPR042277 -
Gma07g00053 382 Pfam Regulator of Vps4 activity in the MVB pathway 18 169 IPR005061 GO:0015031
Gma07g00053 382 MobiDBLite consensus disorder prediction 277 293 - -
Gma07g00053 382 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 9 381 - -
Gma07g00053 382 MobiDBLite consensus disorder prediction 187 366 - -
Gma07g00053 382 PANTHER IST1 FAMILY MEMBER 9 381 IPR005061 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00053 Gma-Chr7 435664 438195 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00053 - - gmx:102665874 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00053 07 435664 438195 Gma07g00053 07 435664 438195 ECH
Gma07g00053 07 435664 438195 Gma08g01889 08 16982603 16984714 GST