Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01810 ATGTACGGCGGCGCCTCCTCGAAGCTTGGCCGCGGCGCCCCCAACCGCCGCTCCTTTCCCCCTCCTCCGGCGCCGCACCGTTCCTCCGCCCCGGGCGGCCGCCTCTCCCTCGGCTCCTCCGCCCGCAACGCTGCGAAGGAGACGGCGGCGCCGGCGGTAGAGGAGACATTCAGCCTCATCTCCGGCAGTAACCCGCTCGCGTTCTCGATGATCATTCGCCTCGCGCCCGACCTCGTGGAGGAGATCAGGCGCGTGGAGGCACAGGGCGGCACCGCGCGCGTGAAGTTCGGCCCCAATCCACACAATCCCACCGGAAACATTATTGATGTTGGTGGGAAGGAGTTCAGATTTACCTGGTCGAAGGATGGTGACCTCTGTGATATTTACGAAGAGCACCGGAGTCGCGATGATGGGAATGGCTTGCTTGTTGAATCTGGGTGTGCCTGGCGCAAGCTGAATGTGCAGCGTGTCTTGGATGAGTCAACCAAGAATCATGTCAAAAGACGGTCAGAGGAAGCTGAACGCAAGATGAAGTCTCGCAAAGCCATTGTCCTAGAGCCTGGGAACCCATCTATGAAGAGCCAGATAAAGGCATTAGCAGCTGTTGAGGCTACACCATGGAAGAATTACAATAAAAAGAAAGAGGCTGCACTTAAGAAAAGGAAAGTGGAAACCCTTCAAGTTGGCGGCCCCCCAAAATCTTCCCATAGATCTGGATTGACTTCAACAAATACTAGTAACAAGGGCAGACATTCCTCTCCTCTTCCGTCTCCACCAGATCATTTTGCTGCTTCATCCTCTCCAATGGGAGCTGTAAATATGTCTAAGAGCTTTGAGGATGCTGTGCCAGCACAAATGACAGGCAAACAAGATACTAATGCTGTTTCTGAGAAAGAAATCCCTACCAGGACAAACAATGCTATGAGGAACACACCAGGAGGCAAGGGAAAAAATGGGTCTAAACCAGTAGATTTGCAGGGCATGCTAATTTCTCTTTTAAAGGATAAACCTAATGGAATGACTTTGAAGGCCTTGGAGAAAGCTGTTGGAGACCCACTTCCAAATTCCATGAAGAAAATTGAGCCAATTATAAAAAAAATTGCAAAATACCAGGCTCCAGGAAGGTATATTTTGAAACCAGGAGGGGATTTAGAAAGCTTAAATAAACCTCAGACTGAAAGTGGAAGTTCTCCTGATGACAATCACAGCCAGATACCTGCTCGTGAAGAGTTTCATGATCAGACATCAGCTCCACAGGAAGGATCTGAAGAAAGAGTCCCAAATATTGATTTGGAGGAAATGGTTAAAGAAAATTCCAAAGTAGAAGAAGAATCAAACACTTTGGAAAAAGTTGATGCCCAACATACTTCACCTGATATCCTTGGTGACAAAAAAGGTTCTGATCATAGTGAAGGGCAAGCAGGAAGCTCCAGTGATAGTGGAAGTGACACTGACAGTGACAGTGACAGCAGCGATAGTGGAAGTGATAGTGGAAGCCACAGTAGGAGCAGAAGCAGAAGTCCTACTGGGACAGGGAGCGGGAGTAGTAGTGACAGTGAAAGTGATGCATCTTCTAGCAGCAAAGAGGGACAGGAGGGATCTGATGAGGAAATAGATATTATGACCAGTGATGATGAAAAAGAGTCAAAACAAAAAACAGAAGTCTCTGACCAAAGGATGCCCTTACCCATTCCAGTAAAATCTCCTGACGGAAGGTCAATGCAGAATGTGGTTGATGAGAAGCAGGATGGCAATGAATCTGATGCAGTTGAAATTGAAAAGGACTTACCTGAGGAACAGGGGACTGAAATGGCTCTACCTCCGGCTACCATTTCTAATAGAGGTGGAAAATATGCAGAAGAGACAAGACCGTTTCCACTTGACTATCAACAGCTCCAGGAACGCCAAAATTATATAGGGAGTTTGTTTGATGAAAGAGAAAATGAAGTTAAAGATAGCTCCAGGCATGAACAGAATGACAGCTCTAATAGGTTTTCCAAAGGTAAACATAAGAGGGGTTCTGATGTGAAGAAGAACATTGAGGAGAAATCAGAACGTGCAAAGAGGTTGAAAGCAGAAAACTTGACCCGTGAACCATTTTCTCCAGGTATAGATGTGCAGACACTGGACAATTCTCGGAACTTGTCTCCTTTCGAATTGACTGAAGACACTGGTAAGGGATCTAATGTACAAGTGTTGAACAGAGCAGAGAGACAGGGGAATTCAAGTGTTGGGTTACAGAAAGGATCCAATCGAGCATTTCCTGGAAAATCTAGTTCAGATTTTCCACAAATAGGTCAAAGGTCATCAGTTCAAACCCCTTCAGAAAACCCTCCCTACCCATTGGAAAAATCAGATAAGCAAGTTGAGAGTGTAAGGCATGGTAAAAAACACTCAGGAAAGGACTTTCATACACGTGAAGCCTCTTCTGTGCAGAAAGATAAATCTAGTAGAGATTCCTTGAATGAAGATATTCATGCCATTGAGAAAAAAGTCCCCAGGAATTCCAGGGATGGTAGTAATGGAAGTAAACAGTCACTATCCATGGATTCTTATTACCAAAAACAAGGTGAAATGGTTGGTAAATTAAAGGAAGGCCGACAAAGTACACAGTCACACTTGGGAACATCACCTAAGGACAACAATCGAATTGGTTTTGATGAATCCCCTGTAACTAATGGGCGAGGTATCTCCCTTCAAAGAGAGCTTTCGGACTTGGAGTTGGGTGAATTCCGTGAGTCCACTCCAGATGAAACTCATGTTGCAAAGCAATTTGAACAAAAAGGTTCATTTAAACTGTTGGAAAACAAAGCAAACACTTCTGAGGATAGGAATTCAGATATTACTAAAGTAAAGCCTTCATTGAAAGCAACTTCAGATTCAGGAAAGCCATCTTCAGCCTTTGTAAATTCTGGTTTTCCCAGTAATTTGGACAACACTAATAAAAAGAATTCGGATAACCATTTTGAAGATTCAACAAAATCTCGTTCTAGAGTTATGCAGGCTCATTTGCAACATTTGAGAGCAGATCATGCAGAAGTTGGATCTCAAAACAAATTGGCAGAAATGAGCAGTAAATATAGAAATAGTGAATCTGGGGTTAGCCAAGATTTTGACTTGGAAGGTCGCAGTGAAAGCAATAGAAGAGTGCCTGCAAATGCATCTAAACCACAAGACAGTAAACGCGGAAACGTTTCCTACCCTGTGAAAGAAATTAAAAGACAAACACCTAATTCAGTGGAAGAGATGGCTGATGGAGGAAAGGATTCTGTTGCAGATAGAAATCATAGCGATCAAAAGAAGAGAGAATCATCTTCAGATGAAAATAGTTGCTCTTATTCAAAGTATGAAAAGGATGAACCTGAGTTGAAGGGACCGATAAGGACTTTCTCCCAATATAAAGAATATGTGCAGGAGTTTCAAGATAAATATGATAGTTACTGCTCCTTGAACAAGATTTTGGAGGGATACAGGGATGAGTTTCAGAAACTAGGCAACGATTTAGAACACGCTAAAGGCAGGGATATGGATAGATATTATGACATTGTGGAGCAGCTGAAGGAATCCTATCGACGCTGTGGACCGAGGCACAAGAGATTGAAGAAAATATTTGTTGTTCTTCATACGGAATTGGAGAATCTCAAGGGAAGGATCAAAGACTTTTCAAACTCGTATAATAAATGA 3684 0.4395 MYGGASSKLGRGAPNRRSFPPPPAPHRSSAPGGRLSLGSSARNAAKETAAPAVEETFSLISGSNPLAFSMIIRLAPDLVEEIRRVEAQGGTARVKFGPNPHNPTGNIIDVGGKEFRFTWSKDGDLCDIYEEHRSRDDGNGLLVESGCAWRKLNVQRVLDESTKNHVKRRSEEAERKMKSRKAIVLEPGNPSMKSQIKALAAVEATPWKNYNKKKEAALKKRKVETLQVGGPPKSSHRSGLTSTNTSNKGRHSSPLPSPPDHFAASSSPMGAVNMSKSFEDAVPAQMTGKQDTNAVSEKEIPTRTNNAMRNTPGGKGKNGSKPVDLQGMLISLLKDKPNGMTLKALEKAVGDPLPNSMKKIEPIIKKIAKYQAPGRYILKPGGDLESLNKPQTESGSSPDDNHSQIPAREEFHDQTSAPQEGSEERVPNIDLEEMVKENSKVEEESNTLEKVDAQHTSPDILGDKKGSDHSEGQAGSSSDSGSDTDSDSDSSDSGSDSGSHSRSRSRSPTGTGSGSSSDSESDASSSSKEGQEGSDEEIDIMTSDDEKESKQKTEVSDQRMPLPIPVKSPDGRSMQNVVDEKQDGNESDAVEIEKDLPEEQGTEMALPPATISNRGGKYAEETRPFPLDYQQLQERQNYIGSLFDERENEVKDSSRHEQNDSSNRFSKGKHKRGSDVKKNIEEKSERAKRLKAENLTREPFSPGIDVQTLDNSRNLSPFELTEDTGKGSNVQVLNRAERQGNSSVGLQKGSNRAFPGKSSSDFPQIGQRSSVQTPSENPPYPLEKSDKQVESVRHGKKHSGKDFHTREASSVQKDKSSRDSLNEDIHAIEKKVPRNSRDGSNGSKQSLSMDSYYQKQGEMVGKLKEGRQSTQSHLGTSPKDNNRIGFDESPVTNGRGISLQRELSDLELGEFRESTPDETHVAKQFEQKGSFKLLENKANTSEDRNSDITKVKPSLKATSDSGKPSSAFVNSGFPSNLDNTNKKNSDNHFEDSTKSRSRVMQAHLQHLRADHAEVGSQNKLAEMSSKYRNSESGVSQDFDLEGRSESNRRVPANASKPQDSKRGNVSYPVKEIKRQTPNSVEEMADGGKDSVADRNHSDQKKRESSSDENSCSYSKYEKDEPELKGPIRTFSQYKEYVQEFQDKYDSYCSLNKILEGYRDEFQKLGNDLEHAKGRDMDRYYDIVEQLKESYRRCGPRHKRLKKIFVVLHTELENLKGRIKDFSNSYNK 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01810 1227 Coils Coil 431 451 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 983 1015 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 838 853 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 865 899 - -
Gma08g01810 1227 Coils Coil 673 693 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 705 779 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 1 48 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 1086 1119 - -
Gma08g01810 1227 Pfam Occludin homology domain 1125 1222 IPR010844 -
Gma08g01810 1227 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 10 1226 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 491 528 - -
Gma08g01810 1227 ProSiteProfiles Occludin/ELL (OCEL) domain profile. 1118 1226 IPR010844 -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 640 695 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 403 470 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 286 313 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 1018 1040 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 913 1119 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 786 837 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 216 271 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 231 253 - -
Gma08g01810 1227 Coils Coil 1154 1174 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 387 402 - -
Gma08g01810 1227 Gene3D - 1129 1225 - -
Gma08g01810 1227 SUPERFAMILY occludin/ELL-like 1126 1223 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 1048 1062 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 381 900 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 951 982 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 285 322 - -
Gma08g01810 1227 MobiDBLite consensus disorder prediction 574 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01810 Gma-Chr8 16133901 16143640 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01810 - - gmx:102660010 2317.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01810 08 16133901 16143640 Gma08g01810 08 16133901 16143640 ECH
Gma07g00116 07 988711 997075 Gma08g01810 08 16133901 16143640 GST