Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00116 ATGTACGGCGGCGCCTCCTCGAAGCTGGGCCGTGGCGCCCCCAACCGCCGCTCCTTCCCCCCTCCTCCGGCGCCGCATCGTTCCTCGGCCCCCGTCGGCCGCCTCTCCCTCGGCTCCTCCGCCAGCAACGCCGCCAAGGACACGGCGGCGGCGGCGGCGGCGGTGGAGGAGACATTCAGCCTCGTCTCCGGCAGCAATCCGCTCGCGTTCTCGATGATCATTCGCCTCGCGCCCGACCTCGTGGAGGAGATCAGGCGCGTGGAGGCACAGGGCGGCACCGCGCGCGTGAAGTTCGGTCCCAATCCACACAATCCCACCGGAAACATTATTGATGTTGGTGGGAAGGAGTTCAGATTTACATGGTCAAAGGATGGTGACCTCTGTGATATTTACGAAGAGCGCCGTAGTGGTGAAGATGGGAATGGTTTGCTTGTTGAATCTGGGTGTGCCTGGCGCAAGCTGAATGTGCAGCGTGTCTTGGATGAGTCAACCAAGAATCACGTCAAAAGACGGTCAGAGGAAGCCGAACGCAAGATAAAGTCTCGCAAAGCCATTGTCCTAGAGCCTGGGAACCCATCTATGAAGAGCCAGATAAAGGCATTAGCAGCTGTTGAGGCTACACCATGGAAGAATTATAATAAAAAGAAAGAGGCTGCACTTAAGAAAAGGAAAGTGGAAACCCTTCAAGTTGGTGGCCCCCCAAAATCTTCCCATAGATCTGGATTGACTTCAACAAATACTAGTACCAAGGGCAGACATTCCTCTCCTCTTCCGTCTCCACCAGATCATTTTGCTGCTTCATCCTCTCCAATGGGAGCTGTAAATATGTCTAAGAGCTTTGAGGATGCTGTGCCCTCACAAATGACAGGCAAACAAGATACTAATGCTGTTTCTGAGAAAGAAATCCCTACCAGAACAAACAATGCTATGAGGAACACGCCAGGAGGCAAGGGGAAAAATTGGTCTAAACCAGTAGATTTGCAGGTCATGTTAATTTCTCTTCTAAAGGATAAACCTAATGGAATGACTTTGAAGGCCTTGGAGAAAGCTGTTGGAGACACACTTCCAAATTCCATGAAGAAAATTGAGCCAATTATAAAAAAAATTGCAAAATACCAGGCTCCAGGAAGGTATATTTTGAAACCAGGAGTGGATTTGGAAAGCTTAAATAAACCTCAGACTGAAAGTGGAAGTTCTCCTGATGACAATCACAGCCAGATACTTGCTCGTGAAGATTTTTATGATCAGACATCAGGTCCACAGGGAGGATCTGAAGAGAAAGTACCAAATATTGATTTGGAGGGAATTGTTAAAGAAAATTCCAAAGTAGAAGAAGAATCAAACAATTTGGAAAAAATTGATGCCCAACATACTTCACCTGATATCCTTGGTGATAAAAAAGGTTCTGATCATAGTGAAGGGCAGGCAGGAAGCTCCagtgatagtggaagtgacagtgatagtgacagtgacagcagcgatagtggaagtgatagtggaagCCACAGTAGGAGCAGAAGCAGAAGTCCTGCTGGGACAGGGAGTGGGAGTAGTAGTGACAGTGAAAGTGATGCATCTTCCAGCAGCAAAGAGTTACTGGAGGGTTCTGATGAGGATGTAGATATTATGACCAGTGATGATGAAAAAGAGTCAAAACCAAAAACAGAAGTCTCTGATCAAAGGATGCCCTTACCCATTCCAGCAAAATCACCTGATCGAAGGTCAATGCAGAATGAGGTTGATGAGCAGCAGGATGGTAATGAATCTGATGCAGTTGAAATTGAAAAGGACTTACCTGAGGAAAAGGAGGCTGAAATGGCTCTACCTCCGGCTACCATTTCTAATAGAGGTGGAAAATATGCAGAAGAGACAAGACCATTTCCACCTGACTATCAACAACTCCAGGAACGCCAAAATTATATAGGGAGTTTGTTTGACGAAAGAGTAAATGAAGTTAAAGATAGTTCTAGGCATGAACAGTATGACAGCTCTAATAGGTTTTCCCAAGGTAAACATAAGAGGGGTTCTGATGCGAAGAACATTGAGGAGAAATCAGAACATGCAAAAAGGTTGAAAGCAGAAAACTTGACCTGTCAACCATTTTCTCCCAGTAATGATGTGCAGACATTCGAGAATTCTCGGAACTTGTCTCCTTTTGAATTTACTGAAGACACTAGTAAGGGACCTAATGTACAAGTGTTGAACAGAGCAGAGAGACAAGGGAATTCAAGTGTTGGGTTACAGAAAGGACCCAATCGAGCATTTCCTGGAAAATCTGGTTCAGATTTTCCACAAATAGGTCAAAGGTCATCAGCTCAAATCCCTTCAGAAAACCCTCCCTACCCATTGGAAAAATCAGATAAGCAACTTGAGAGTGTAAGGCACAGTAAAAAACACTCAGGAAAGGACTTCCATGTACGGGAAGCTTCTTCTGTGCAGAAAGATAAATCTCAGAGAGATTCCTTGAATGAAGATATTCATGCCATTGAGAAAAAAGTTCCCAGGAATTCCAGGGATGGTAGTAATGGAAGTAAACAGTCACTATCCATGGATTCTTATTACCAAAAACAAGGTGAAATGGTTGGTAAATTAAAGGAAGGCAGACAAAGTACACAGTCACACTTGGGAACATCACCTAAGGACAACAATCAAATTGGTTTTGATCAATCCCCTGAAACTAATGGGCGAGGTATCTCTCTTCAAAGAGAGCTTTCAGACTTGGAGTTGGGTGAATTTCGTGAGTCCACTCCAGATGAAACTCATGTTGCAAAGCAATTTGAACGAAAAGGTTCATTTAAACAGTTGGAAAACAAAGCAAACACTTCAGAGGATAGAAATTCTGATATTACTAAAGTAAAACCTTCTTTGAAAGCAACTTCAGATTTAGGAAAGCCATCCTCAGCCTTTGTAAATTCTGGGTTTCCCTGTAATTTCGACAACACTAATAAAAAGAACTCAGATAATCATTTTGAAGATTCAACAAAATCTCGTTCTAGAGTTATGCAGACTCATTCGCAACATTTAAGAGCAGATCCTGCAGAAGTTGGATCTCAAAACAAATTGGCAGAAATGAGCAGTAAATATAGAAATAGTGAATCTGGGGGGAGCCAAGATTTTGACTTGGAAGGTCGCAGTGAAAGCAATAGAAGAGTGCCTGCAAATGCATCTAAACCACAAGACAGTAAACGCGGAATAGTTTCTGACCCTGTGAAAGAAAGTAAAAGACAAACACCTAATTCAGTGGAAGAGATGGCTGATGGAGGAAAGGATTCTGTGTTTGCAGATAGAAATCATAGCGATCAAAAGAAGAGAGAATCATCAGATGAAAATAGTTGCTCTTATTCAAAGTATGAAAAGGATGAACCTGAATTGAAGGGACCAATAAGGACTTTCTCCCAATATAAAGAATATGTGCAGGAATTTCAAGATAAATATGATAGTTACTGCTCCTTAAACAAGATTTTGGAGGGATACCGGGATCAGTTTCAGAAACTAGGCAACGATTTAGAACTTGCTAAAGGCAGGGATATGGATAGATACTATGACATCGTGGAGCAGCTGAAGGAATCCTATCGACGCTGTGGACCGAGGCACAAGAGATTGAGGAAAATATTTGTTGTTCTTCATACGGAATTGGAGAATCTCAAGCGAAGGATCAAAGACTTTGCAAACTCGTATAATAAATGA 3687 0.4266 MYGGASSKLGRGAPNRRSFPPPPAPHRSSAPVGRLSLGSSASNAAKDTAAAAAAVEETFSLVSGSNPLAFSMIIRLAPDLVEEIRRVEAQGGTARVKFGPNPHNPTGNIIDVGGKEFRFTWSKDGDLCDIYEERRSGEDGNGLLVESGCAWRKLNVQRVLDESTKNHVKRRSEEAERKIKSRKAIVLEPGNPSMKSQIKALAAVEATPWKNYNKKKEAALKKRKVETLQVGGPPKSSHRSGLTSTNTSTKGRHSSPLPSPPDHFAASSSPMGAVNMSKSFEDAVPSQMTGKQDTNAVSEKEIPTRTNNAMRNTPGGKGKNWSKPVDLQVMLISLLKDKPNGMTLKALEKAVGDTLPNSMKKIEPIIKKIAKYQAPGRYILKPGVDLESLNKPQTESGSSPDDNHSQILAREDFYDQTSGPQGGSEEKVPNIDLEGIVKENSKVEEESNNLEKIDAQHTSPDILGDKKGSDHSEGQAGSSSDSGSDSDSDSDSSDSGSDSGSHSRSRSRSPAGTGSGSSSDSESDASSSSKELLEGSDEDVDIMTSDDEKESKPKTEVSDQRMPLPIPAKSPDRRSMQNEVDEQQDGNESDAVEIEKDLPEEKEAEMALPPATISNRGGKYAEETRPFPPDYQQLQERQNYIGSLFDERVNEVKDSSRHEQYDSSNRFSQGKHKRGSDAKNIEEKSEHAKRLKAENLTCQPFSPSNDVQTFENSRNLSPFEFTEDTSKGPNVQVLNRAERQGNSSVGLQKGPNRAFPGKSGSDFPQIGQRSSAQIPSENPPYPLEKSDKQLESVRHSKKHSGKDFHVREASSVQKDKSQRDSLNEDIHAIEKKVPRNSRDGSNGSKQSLSMDSYYQKQGEMVGKLKEGRQSTQSHLGTSPKDNNQIGFDQSPETNGRGISLQRELSDLELGEFRESTPDETHVAKQFERKGSFKQLENKANTSEDRNSDITKVKPSLKATSDLGKPSSAFVNSGFPCNFDNTNKKNSDNHFEDSTKSRSRVMQTHSQHLRADPAEVGSQNKLAEMSSKYRNSESGGSQDFDLEGRSESNRRVPANASKPQDSKRGIVSDPVKESKRQTPNSVEEMADGGKDSVFADRNHSDQKKRESSDENSCSYSKYEKDEPELKGPIRTFSQYKEYVQEFQDKYDSYCSLNKILEGYRDQFQKLGNDLELAKGRDMDRYYDIVEQLKESYRRCGPRHKRLRKIFVVLHTELENLKRRIKDFANSYNK 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00116 1228 Pfam Occludin homology domain 1126 1223 IPR010844 -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 414 1119 - -
Gma07g00116 1228 Coils Coil 812 832 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 1064 1079 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 218 322 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 763 777 - -
Gma07g00116 1228 SUPERFAMILY occludin/ELL-like 1127 1224 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 233 255 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 697 749 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 647 693 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 1088 1119 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 1 40 - -
Gma07g00116 1228 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 10 1228 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 589 604 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 1019 1041 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 960 983 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 431 472 - -
Gma07g00116 1228 ProSiteProfiles Occludin/ELL (OCEL) domain profile. 1119 1227 IPR010844 -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 906 951 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 270 315 - -
Gma07g00116 1228 Gene3D - 1130 1226 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 787 838 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 984 998 - -
Gma07g00116 1228 Coils Coil 433 456 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 839 854 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 866 900 - -
Gma07g00116 1228 MobiDBLite consensus disorder prediction 493 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00116 Gma-Chr7 988711 997075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00116 - - gmx:100791352 2278.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00116 07 988711 997075 Gma07g00116 07 988711 997075 ECH
Gma07g00116 07 988711 997075 Gma08g01810 08 16133901 16143640 GST