Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01779 ATGTCGAAGCAAAGCTCACCTTCAATGGTGTCGGTAGCACAAGCTACATGCCAGCAAGAACCTGCTTCAAAGTTGCGGCGTCATAAGGGAAATGGAAGGGGAGGTGTTAAGGTTTTGAGCGTAGGAAGAGGAGGAGTAGCTTCTTCCATTGCTTCTCCCTCTGCTAAGAACCTCGTATATGGTGGAGTATTGTCAAGCAGAAATTTTGTGAGCAAAGATATCAACTTTGGGGTCGGGGCTCGTGCCGCAATCCTCCAGGGGGTAACTGAGGTTGCTGATGCTGTCAAAGTTACCATGGGACCCAAGGGTCACAATGTGATAATTGAGAGAAGTCGTGGGAATCCCAGGATCACGAAGGACGGTGTGACTGTGGCCAGAAGTATCAAATTTAAAGACAAATCCAAAAATGTTGGGGCGGATCTTGTCAAGCAGGTGGCCAAGGCTACCAACACTGCTGCTGGAGACGGTACAACTTGTGCAACTGTTTTGACTCAGGCAATACTCACAGAAGGATGTAAATCGATTGCTGCTGGCATAAATGTTATGGACTTACGTAATGGAATAAATAAGGCAGTTGATGCTGTAATTACTGAGTTGAAGAGCAGAACATTGATGATAAGTACACCAGAAGAGATAACCCAGGTTGGAACTATATCTGCGAATGGGGAGCGTGATATTGGAGAATTGATGGCTAGGGCAATGGAGAAAGTTGGGAAGGAAGGAGTCATTACTGTTGTTGATGGGAACACTTTGGATAATGAATTGGAAGTGGTAGAAGGAATGAAGTTAACCAGAGGATACATATCTCCTTATTTTATTACTGATCAGAAGACCCGGAAATGTGAATTGGAGAACCCCTTTATTCTCATCCATGACAAGAAAATTTCTGACATGAATTCATTGCTGAAAATACTGGAGCTGGCAGTAACGAAAAAAAGATCACTCTTAGTTGTTGCTGAAGATGTTGAGAGTGATGCGTTGGCTATGCTCATACTCAACAAGCATCACGCGGGGCTTAAGGTTTGTGCTGTAAAAGCTCCTGGTTTTGGGGATAATAGAAGAGCAAGTCTAGACGATCTTGCAATTCTTACTGGAGGAGAGGTCATCACTGATGAGCGTGGTTTGTCTCTTGATAAAGTCCAACCAGAAATGCTTGGCACTGCAAAAAAGGTTACTATCACCATTGATGACACTATTATTCTACATGGTGGTGGGGATAAGAAGGTCATTGAAGAGAGATGTGAACAGCTGAGGACAGCTATGGAAGAGAGTTCTGCCACATTTGATAAAGAAAAAGCACAGGAACGCCTATCAAAACTATCTGGTGGTGTAGCTGTTTTCAAAGTTGGGGGGGCTAGTGAGGCCGAAGTTGGGGAAAGGAAAGATAGAGTAACAGATGCTTTAAATGCCACTAGAGCTGCTGTGGAAGAGGGAATTGTTCCAGGTGGTGGAGTTGCTCTCCTATATGCTACCAAAGTCTTGGATAACCTTCAAACTCAAAATGAAGATGAGAAGAGAGGAGTACAAATTATTCAGAATGCACTCAAGGCACCTACCTCTACAATAGCTTCAAATGCTGGTTTTGATGGTGCTTTGGTCCACAGCAAATTGTTGGAACAAGATGATCATAATTTAGGTTTTGATGCTGCTAAAGCAGGTGTCTATGTTGATATGGTAAAGGCTGGAATAATAGATCCTCTTAAAGTTGTTAGAACAGCTTTGGTAGATGCTGCCAGTGTGTCATTGCTACTGACAACAACCGAGGCAGCTGTGTTGGATAATCCACATGACAAAAATAAACCTCCTAGTCGGGTGCCAGATATGGATGATTTGGATCTCTAA 1842 0.4343 MSKQSSPSMVSVAQATCQQEPASKLRRHKGNGRGGVKVLSVGRGGVASSIASPSAKNLVYGGVLSSRNFVSKDINFGVGARAAILQGVTEVADAVKVTMGPKGHNVIIERSRGNPRITKDGVTVARSIKFKDKSKNVGADLVKQVAKATNTAAGDGTTCATVLTQAILTEGCKSIAAGINVMDLRNGINKAVDAVITELKSRTLMISTPEEITQVGTISANGERDIGELMARAMEKVGKEGVITVVDGNTLDNELEVVEGMKLTRGYISPYFITDQKTRKCELENPFILIHDKKISDMNSLLKILELAVTKKRSLLVVAEDVESDALAMLILNKHHAGLKVCAVKAPGFGDNRRASLDDLAILTGGEVITDERGLSLDKVQPEMLGTAKKVTITIDDTIILHGGGDKKVIEERCEQLRTAMEESSATFDKEKAQERLSKLSGGVAVFKVGGASEAEVGERKDRVTDALNATRAAVEEGIVPGGGVALLYATKVLDNLQTQNEDEKRGVQIIQNALKAPTSTIASNAGFDGALVHSKLLEQDDHNLGFDAAKAGVYVDMVKAGIIDPLKVVRTALVDAASVSLLLTTTEAAVLDNPHDKNKPPSRVPDMDDLDL 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01779 613 MobiDBLite consensus disorder prediction 1 35 - -
Gma08g01779 613 Coils Coil 407 427 - -
Gma08g01779 613 SUPERFAMILY GroEL-intermediate domain like 206 272 IPR027410 -
Gma08g01779 613 Hamap Chaperonin GroEL [groEL]. 70 611 IPR001844 GO:0042026|GO:0140662
Gma08g01779 613 Pfam TCP-1/cpn60 chaperonin family 91 591 IPR002423 GO:0005524
Gma08g01779 613 SUPERFAMILY GroEL equatorial domain-like 75 591 IPR027413 -
Gma08g01779 613 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 62 605 - -
Gma08g01779 613 PANTHER CHAPERONIN CPN60-2, MITOCHONDRIAL 62 605 - -
Gma08g01779 613 Gene3D GroEL 260 441 IPR027409 -
Gma08g01779 613 Gene3D - 205 478 IPR027410 -
Gma08g01779 613 PRINTS 60kDa chaperonin signature 151 178 IPR001844 GO:0042026|GO:0140662
Gma08g01779 613 PRINTS 60kDa chaperonin signature 418 443 IPR001844 GO:0042026|GO:0140662
Gma08g01779 613 PRINTS 60kDa chaperonin signature 336 359 IPR001844 GO:0042026|GO:0140662
Gma08g01779 613 PRINTS 60kDa chaperonin signature 466 487 IPR001844 GO:0042026|GO:0140662
Gma08g01779 613 PRINTS 60kDa chaperonin signature 95 121 IPR001844 GO:0042026|GO:0140662
Gma08g01779 613 Gene3D - 74 591 IPR027413 -
Gma08g01779 613 Coils Coil 494 514 - -
Gma08g01779 613 MobiDBLite consensus disorder prediction 1 21 - -
Gma08g01779 613 CDD GroEL 72 593 IPR001844 GO:0042026|GO:0140662
Gma08g01779 613 TIGRFAM GroEL: chaperonin GroL 71 596 IPR001844 GO:0042026|GO:0140662
Gma08g01779 613 ProSitePatterns Chaperonins cpn60 signature. 473 484 IPR018370 GO:0005524|GO:0006457
Gma08g01779 613 MobiDBLite consensus disorder prediction 593 613 - -
Gma08g01779 613 SUPERFAMILY GroEL apical domain-like 252 444 IPR027409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01779 Gma-Chr8 15819062 15826296 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01779 K04077 - gmx:100778935 1068.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00088 07 729925 736968 Gma08g01779 08 15819062 15826296 GST