Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01744 ATGTATTCAGGGGTGAAAGGGTTGTTCAACAGAAGCCAGAAGGTGAAGGGAACGGTGGTGTTGATGCGTAAGAATGTGCTTGACATCAACAGCATAACGAGTGTGAGAGGGCTTATTGGCACCGGCATCAACATAATTGGCTCAACAATTGATGGTCTTACTTCCTTCTTGGGTCGTTCTGTGTGTCTTCAGTTGATTAGTGCTACCAAGGCTGATGGAAATGGAAATGGGGTAGTTGGAAAGAAGACCTATTTGGAAGGTATTATTACGTCGATACCAACATTGGGAGCAGGCCAATCTGCGTTCACTATTCATTTTGAATGGGACGCAGACATGGGAATTCCTGGAGCATTTTTAATAAAAAATTATATGCAAGTTGAGCTCTTCCTAGTGAGTTTGACTCTTGAAGACATTCCTAATCAAGGAAGCATGCACTTTGTTTGCAACTCATGGGTTTACAATTCTAAAGTTTACGAAAAGGATCGGATTTTCTTTGCCAGTGAGACATATGTTCCAAGTGAAACACCTGGTCCATTAGTGACATATAGAGAAGCAGAATTGCAGGCTCTAAGAGGAAATGGAACAGGGAAGCGCAAGGAATGGGACAGAGTTTATGATTATGATGTTTACAATGATTTGGGCAATCCTGACAGTGGTGAAAACTTTGCTCGTCCAGTTCTTGGAGGATCTCTCACTCATCCCTACCCTCGTAGGGGAAGAACCGGTAGAAAACCAACAAAGAAAGATCCCAACAGTGAGAAACCTGGCGAGGCTTATATACCAAGAGATGAAAATTTCGGTCACTTGAAATCATCTGATTTCCTTACTTATGGGCTAAAATCTTTAACTCGAAGCTTCTTGCCTGCACTCAAAACTGTTTTTGATATAAATTTCACACCGAACGAGTTTGATAGCTTCGAAGAAGTGCGTGCACTCTGTGAAGGTGGAATTAAACTGCCTACAGATATACTTAGCAAAATTAGCCCCTTACCTGTGCTCAAGGAAATCTTCCGCACTGATGGTGAAAGTGTCCTAAAGTTTTCAGTACCTGATTTAATTAAAGTTAGTAAATCTGCATGGATGACTGATGAAGAATTTGCAAGAGAGATGATTGCTGGTGTAAACCCTTGTGTGATTCGTCGTCTACAAGAGTTCCCACCACAAAGCAAGCTTGATCCCTCAGTCTATGGTGATCAAACAAGTAAAATGACTATAGATCACTTGGAGATTAACCTTGAAGGGCTCACAGTAGATAAGGCAATATATATCAGATGTcgattattcatattagatcaccatgacacatttatgccatttttgagaaggatagatgaatctaaatcatcaaaggcttatgccactagaacaatccttttcttgaaagatgatgggaccttaaagccattggccatcgaattaagtttgccacatccaggtcaacaacagcttggtgcctatagtaaagtcatcttgcctgcaaaccaaggtgtagaaagtacaatttggctgttggcaaaggctcatgttattgtgaatgactcgtgctatcatcaactcataagccactggttgaatactcatgccgtgattgagccatttgtcatagcaacaaacaggaatctcagtattcttcaccctatttataaacttctatttcctcactatcgtgacacaatgaatatcaatgcacttgctcgacaatcacttattaatgctgatggctttatagagaaaacctttttgggtggaaagtatgctgtggagatatcttcgtcaggttacaaaaattgggttttcctcgaccaagcattacctgctgatctcatcaagagAGGAATGGCTATTGAGGATTCATCTTGTCCCAACGGCCTTCGTCTTGTGATAGAGGACTACCCTTATGCTGTTGATGGACTAGAAATATGGGATGCTATTAAGACATGGGTACAAGAGTATGTCTCCTTGTACTATGCAACAAATGATGCAATTAAAAAAGACCATGAACTCCAAGCATGGTGGAAAGAAGTTGTTGAGAAGGGACATGGTGACTTGAAAGACAAGCCTTGGTGGCCTAAAATGCAGACTCTTCAAGAGCTTATTCAATCATGTTCTACTATCATATGGATTGCTTCAGCTCTCCATGCAGCTGTTAATTTTGGACAATACCCTTATGGTGGTTTTATCCTAAACCGTCCAACTCTTAGCAGGAGATGGATTCCAGAAGAAGGAACTCCAGAATATGACGAGATGACAAAGAATCCTCAAAAGGCTTATTTGAGAACAATCACGCCAAAGGTAAGATTTAGTAATATGGGTGATGTTCAGAATGCTAATTAA 2334 0.3123 MYSGVKGLFNRSQKVKGTVVLMRKNVLDINSITSVRGLIGTGINIIGSTIDGLTSFLGRSVCLQLISATKADGNGNGVVGKKTYLEGIITSIPTLGAGQSAFTIHFEWDADMGIPGAFLIKNYMQVELFLVSLTLEDIPNQGSMHFVCNSWVYNSKVYEKDRIFFASETYVPSETPGPLVTYREAELQALRGNGTGKRKEWDRVYDYDVYNDLGNPDSGENFARPVLGGSLTHPYPRRGRTGRKPTKKDPNSEKPGEAYIPRDENFGHLKSSDFLTYGLKSLTRSFLPALKTVFDINFTPNEFDSFEEVRALCEGGIKLPTDILSKISPLPVLKEIFRTDGESVLKFSVPDLIKVSKSAWMTDEEFAREMIAGVNPCVIRRLQEFPPQSKLDPSVYGDQTSKMTIDHLEINLEGLTVDKAIYIRCRLFILDHHDTFMPFLRRIDESKSSKAYATRTILFLKDDGTLKPLAIELSLPHPGQQQLGAYSKVILPANQGVESTIWLLAKAHVIVNDSCYHQLISHWLNTHAVIEPFVIATNRNLSILHPIYKLLFPHYRDTMNINALARQSLINADGFIEKTFLGGKYAVEISSSGYKNWVFLDQALPADLIKRGMAIEDSSCPNGLRLVIEDYPYAVDGLEIWDAIKTWVQEYVSLYYATNDAIKKDHELQAWWKEVVEKGHGDLKDKPWWPKMQTLQELIQSCSTIIWIASALHAAVNFGQYPYGGFILNRPTLSRRWIPEEGTPEYDEMTKNPQKAYLRTITPKVRFSNMGDVQNAN 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01744 777 ProSitePatterns Lipoxygenases iron-binding region signature 2. 544 554 IPR020834 GO:0016702|GO:0046872
Gma08g01744 777 ProSitePatterns Lipoxygenases iron-binding region signature 1. 517 531 IPR020833 GO:0016702|GO:0046872
Gma08g01744 777 Gene3D - 171 269 - -
Gma08g01744 777 Gene3D - 495 774 - -
Gma08g01744 777 PRINTS Plant lipoxygenase signature 234 253 IPR001246 GO:0016491
Gma08g01744 777 PRINTS Plant lipoxygenase signature 452 476 IPR001246 GO:0016491
Gma08g01744 777 PRINTS Plant lipoxygenase signature 136 154 IPR001246 GO:0016491
Gma08g01744 777 PRINTS Plant lipoxygenase signature 300 321 IPR001246 GO:0016491
Gma08g01744 777 PRINTS Plant lipoxygenase signature 201 217 IPR001246 GO:0016491
Gma08g01744 777 PRINTS Plant lipoxygenase signature 345 361 IPR001246 GO:0016491
Gma08g01744 777 PRINTS Plant lipoxygenase signature 384 403 IPR001246 GO:0016491
Gma08g01744 777 PRINTS Plant lipoxygenase signature 162 183 IPR001246 GO:0016491
Gma08g01744 777 SMART LH2_4 13 167 IPR001024 GO:0005515
Gma08g01744 777 Gene3D - 359 494 - -
Gma08g01744 777 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 7 765 - -
Gma08g01744 777 MobiDBLite consensus disorder prediction 220 264 - -
Gma08g01744 777 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 169 777 IPR013819 GO:0016702|GO:0046872
Gma08g01744 777 Pfam Lipoxygenase 179 766 IPR013819 GO:0016702|GO:0046872
Gma08g01744 777 CDD PLAT_LH2 14 167 IPR042057 -
Gma08g01744 777 Pfam PLAT/LH2 domain 73 165 IPR001024 GO:0005515
Gma08g01744 777 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 13 170 IPR036392 GO:0005515
Gma08g01744 777 PRINTS Lipoxygenase signature 537 557 IPR013819 GO:0016702|GO:0046872
Gma08g01744 777 PRINTS Lipoxygenase signature 517 534 IPR013819 GO:0016702|GO:0046872
Gma08g01744 777 PRINTS Lipoxygenase signature 499 516 IPR013819 GO:0016702|GO:0046872
Gma08g01744 777 SUPERFAMILY Lipoxigenase 172 765 IPR036226 -
Gma08g01744 777 PANTHER LIPOXYGENASE 7 765 IPR000907 GO:0016702|GO:0046872
Gma08g01744 777 Gene3D PLAT/LH2 domain 4 170 - -
Gma08g01744 777 Gene3D - 270 358 IPR027433 -
Gma08g01744 777 MobiDBLite consensus disorder prediction 245 264 - -
Gma08g01744 777 ProSiteProfiles PLAT domain profile. 41 166 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01744 Gma-Chr8 15492717 15498109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01744 12 766 Acyl Lipid Metabolism Gene Families AT1G55020 57.812 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01744 K15718 - gmx:547694 1518.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00327 07 2828654 2834362 Gma08g01744 08 15492717 15498109 GST