Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00327 ATGTTGATTGGTTCTCTCTTAAACAGGCGTCCTAAGATCAAGGGGACTGTGGTGTTGATGACCAAGAATGTGTTCGACGTCAACGACTTCATGGCGACTACTAGGGGCGGACCAGCCGCTGTTGCTGGCGGCATCTTCGGTGCCGCCCAGGACATTGTTGGTGGAATAGTTGATGGTGCTACGGCCATCTTCAGCCGTAACATTGCCATACAGTTGATCAGTGCCACCAAGTCTGAGAATGCACTTGGACATGGGAAAGTTGGAAAGCTAACCTATTTGGAGAAACATCTTCCTTCATTACCAAACTTGGGAGATAGGCAGGATGCATTCGATGTTTATTTTGAATGGGATGAGAGTTTTGGAATTCCAGGAGCATTTTACATCAAAAACTATATGCAATCTGAGTTTTTCCTTGTGAGTTTCAAGCTTGAAGACGTTCCAAATCATGGAACCATTCTCTTTGCTTGCAACTCATGGGTTTACAACGCAAAATTGTACAAAAAAGATCGCATTTTCTTTGCTAATAAGACATATCTTCCAAATGACACTCCAACTCCACTAGTAAAGTACAGAAAAGAAGAATTGGAAAATCTAAGAGGAGATGGAAGAGGGGAGCGCAAGGAACTTGATAGGATCTATGATTATGATGTCTATAATGATTTGGGCAACCCAGACGAGAATGACGATCTAGCTCGTCCTATTCTTGGCGGGTCTAGTAAGCATCCATACCCTCGCAGGGGAAGAACTGGTAGAAAACCAACAAAGAAAGACCCCAGATGTGAGAGACCAACCAGCGACACTTACATCCCGAGAGACGAAAATTTTGGTCACTTGAAGTCATCAGACTTCCTTACATATGCAATAAAATCCTTAACTCAAAACGTTTTACCTCAATTCAACACTGCATTTGGTTTCAATAATGAGTTTGATAGCTTCGAGGACGTGCGTTGTCTCTTTGATGGCGGAGTTTATCTCCCTACAGATGTACTCAGCAAAATTAGCCCCATACCGGTGCTCAAAGAAATCTTCCGCACTGATGGTGAGCAAGCCCTCAAGTTTCCACCACCTCATGTCATCAAAGCAGTTCGTGAGTCTGAATGGATGACTGATGAAGAATTTGGAAGAGAGATGCTTGCTGGTGTTAATCCTGGCATGATTCAACGCCTTCAAGAGTTCCCTCCAAAGAGCAAGCTAGATCCCACAGAGTTTGGAGATCAAACTAGTACAATAACCAAAGAACACTTGGAGATCAACCTTGGTGGACTCACCGTAGAACAGGCACTGAAAGGTAACAAATTGTTCATATTAGATCACCATGATGCATTCATACCGTTTATGAATTTGATCAATGGCCTGCCCACTGCAAAGTCTTATGCCACAAGGACCATCCTTTTCTTGCAAGACGATGGCACATTGAAGCCATTAGCCATTGAGTTAAGTTTGCCACATCCTAGGGGACATGAGTTTGGAGCCGATAGTAGAGTAGTCTTGCCCCCAGCCGCAGTCAACAGCGCTGAAGGCACAATTTGGTTAATTGCCAAGGCTTATGTTGCTGTCAATGACACTGGCTATCACCAACTCATAAGCCACTGGTTAAATACTCATGCCACAATTGAGCCATTTGTCATAGCAACAAACAGGCATCTTAGTGTGCTCCACCCTATTCATAAGCTTCTCTTGCCTCACTACCGTGACACAATGAATATCAATGCACTTGCACGACAATCGCTCATCAACGCAGATGGCGTTATCGAGCGATCATTTTTGCCCGGCAAATACTCTCTGGAGATGTCTTCGGCAGTTTACAAGAGTTGGGTTTTCACTGATCAAGCCCTTCCTGCAGATCTTATCAAGAGAGGAATGGCAATTGAGGATCCCTGTGCCCCCCACGGCCTTCGCCTTGTGATAGAGGACTACCCTTATGCTGTTGATGGACTAGAAATATGGGATGCTATTCAGACATGGGTTAAGAACTATGTCTCCTTGTATTACCCAACAGATGATGCAATTAAGAAAGACTCTGAGCTCCAAGCTTGGTGGAAGGAAGCTGTTGAGACGGGTCACGGTGACTTGAAAGACAAGCCATGGTGGCCTAAGTTGAACACTCCTCAAGATTTGGTTCACATTTGCTCCATTATCATATGGATAGCTTCAGCTCTCCATGCAGCAGTGAATTTTGGACAATACCCTTATGGAGGTTTGATCCTAAACCGTCCAACTTTAACCAGAAGATTTCTCCCTGAACCAGGAAGCAAAGAATATGAGGAGCTTTCAACCAATTATCAAAAGGCTTACCTGAGAACAATTACAAGAAAGATTGAGGCCCTTGTGGACCTTTCAGTGATAGAGATATTGTCAAGACATGCTTCTGATGAGATCTACCTTGGGAAGAGGGACAGTGACGATTGGACTGATGACCAAAAGGCAATTCAAGCCTTTGAAAAGTTTGGAACCAAGCTGAAGGAAATTGAGGCCAAAATCAATTCGAGGAACAAAGATTCAAGCCTTAGAAACCGTAATGGACCGGTTCAGATGCCTTATACTGTGCTTCTTCCTACCAGTGAGGAAGGCCTTACTTTCAGAGGAATTCCCAACAGCATCTCTATCTAA 2610 0.4406 MLIGSLLNRRPKIKGTVVLMTKNVFDVNDFMATTRGGPAAVAGGIFGAAQDIVGGIVDGATAIFSRNIAIQLISATKSENALGHGKVGKLTYLEKHLPSLPNLGDRQDAFDVYFEWDESFGIPGAFYIKNYMQSEFFLVSFKLEDVPNHGTILFACNSWVYNAKLYKKDRIFFANKTYLPNDTPTPLVKYRKEELENLRGDGRGERKELDRIYDYDVYNDLGNPDENDDLARPILGGSSKHPYPRRGRTGRKPTKKDPRCERPTSDTYIPRDENFGHLKSSDFLTYAIKSLTQNVLPQFNTAFGFNNEFDSFEDVRCLFDGGVYLPTDVLSKISPIPVLKEIFRTDGEQALKFPPPHVIKAVRESEWMTDEEFGREMLAGVNPGMIQRLQEFPPKSKLDPTEFGDQTSTITKEHLEINLGGLTVEQALKGNKLFILDHHDAFIPFMNLINGLPTAKSYATRTILFLQDDGTLKPLAIELSLPHPRGHEFGADSRVVLPPAAVNSAEGTIWLIAKAYVAVNDTGYHQLISHWLNTHATIEPFVIATNRHLSVLHPIHKLLLPHYRDTMNINALARQSLINADGVIERSFLPGKYSLEMSSAVYKSWVFTDQALPADLIKRGMAIEDPCAPHGLRLVIEDYPYAVDGLEIWDAIQTWVKNYVSLYYPTDDAIKKDSELQAWWKEAVETGHGDLKDKPWWPKLNTPQDLVHICSIIIWIASALHAAVNFGQYPYGGLILNRPTLTRRFLPEPGSKEYEELSTNYQKAYLRTITRKIEALVDLSVIEILSRHASDEIYLGKRDSDDWTDDQKAIQAFEKFGTKLKEIEAKINSRNKDSSLRNRNGPVQMPYTVLLPTSEEGLTFRGIPNSISI 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00327 869 PRINTS Plant lipoxygenase signature 170 191 IPR001246 GO:0016491
Gma07g00327 869 PRINTS Plant lipoxygenase signature 242 261 IPR001246 GO:0016491
Gma07g00327 869 PRINTS Plant lipoxygenase signature 391 410 IPR001246 GO:0016491
Gma07g00327 869 PRINTS Plant lipoxygenase signature 144 162 IPR001246 GO:0016491
Gma07g00327 869 PRINTS Plant lipoxygenase signature 458 482 IPR001246 GO:0016491
Gma07g00327 869 PRINTS Plant lipoxygenase signature 209 225 IPR001246 GO:0016491
Gma07g00327 869 PRINTS Plant lipoxygenase signature 782 796 IPR001246 GO:0016491
Gma07g00327 869 PRINTS Plant lipoxygenase signature 306 327 IPR001246 GO:0016491
Gma07g00327 869 PRINTS Plant lipoxygenase signature 351 367 IPR001246 GO:0016491
Gma07g00327 869 Gene3D - 279 363 IPR027433 -
Gma07g00327 869 PANTHER LIPOXYGENASE 2 869 - -
Gma07g00327 869 PRINTS Lipoxygenase signature 525 542 IPR013819 GO:0016702|GO:0046872
Gma07g00327 869 PRINTS Lipoxygenase signature 507 524 IPR013819 GO:0016702|GO:0046872
Gma07g00327 869 PRINTS Lipoxygenase signature 545 565 IPR013819 GO:0016702|GO:0046872
Gma07g00327 869 CDD PLAT_LH2 12 175 IPR042057 -
Gma07g00327 869 MobiDBLite consensus disorder prediction 254 273 - -
Gma07g00327 869 Pfam Lipoxygenase 187 852 IPR013819 GO:0016702|GO:0046872
Gma07g00327 869 ProSiteProfiles PLAT domain profile. 46 174 IPR001024 GO:0005515
Gma07g00327 869 Gene3D - 504 868 - -
Gma07g00327 869 SUPERFAMILY Lipoxigenase 179 869 IPR036226 -
Gma07g00327 869 MobiDBLite consensus disorder prediction 224 273 - -
Gma07g00327 869 Gene3D PLAT/LH2 domain 3 178 - -
Gma07g00327 869 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 12 178 IPR036392 GO:0005515
Gma07g00327 869 SMART LH2_4 11 175 IPR001024 GO:0005515
Gma07g00327 869 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 177 869 IPR013819 GO:0016702|GO:0046872
Gma07g00327 869 PANTHER LIPOXYGENASE 2 869 IPR000907 GO:0016702|GO:0046872
Gma07g00327 869 Gene3D - 365 500 - -
Gma07g00327 869 ProSitePatterns Lipoxygenases iron-binding region signature 2. 552 562 IPR020834 GO:0016702|GO:0046872
Gma07g00327 869 Pfam PLAT/LH2 domain 84 173 IPR001024 GO:0005515
Gma07g00327 869 ProSitePatterns Lipoxygenases iron-binding region signature 1. 525 539 IPR020833 GO:0016702|GO:0046872
Gma07g00327 869 Gene3D - 179 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00327 Gma-Chr7 2828654 2834362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00327 12 869 Acyl Lipid Metabolism Gene Families AT1G55020 56.142 0.0 988
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00327 K15718 - gmx:100802459 1751.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00327 07 2828654 2834362 Gma08g01744 08 15492717 15498109 GST