Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00526 ATGAATTTCAATGGGATCAATAGCAGATCCCTACTCCCTGGGCAAAGTGATCCGCAATCTGAAACTGAAAACAATTGGGCTGGCCCAAATTTCACAAAGAAAGATGAGTTAAGCAAGGTGACATGGCAAATTCCTAGTGGAGCCGAAAACGTGGCAAGCGAAGTTGAAGATTATAATTGCAATAATACCCCTAGCATTGCATTTCCCATTCTGTTCGCGATTCCGATTGTTGTGATCCGTACAACACAGCACAACACCATGGCTGGCCCCAACCCCATCCCCAAGTGGTTGTTTCTCTCTCTGACTCTGATCCTCAGTCTCTCTGTCTCCGTCGGCGCCCGCCACTTCGTCCTCGTCCTCTCCCAGGAAGACTACAAGGAcGACCCCCCCGCCGATCCCGACTCCGCCGCCGAGTGGGACGAGTTCGGCGACGGAGACTCCCACAAATCCGAGGACGACCTCGACCCCGGCTCATGGCGCCCCATCTTCGAGCCCCCCGCCGGAGATCCCCAACCCCTCCCCGAATCCGACGCCGCCTACCACTCCGCCGTCCACAAGCTCATGTCCGGCGACCCCGACCTGATCCAGGACGGCGCCGCCGAGATCGGCGCCTTGGCCGAGACCGGGCACCCCGCGTCTCAATCGGTGCTAGGGTTTTTGTGGGGAATGGGGCTTTTGAGGGAGCGAAGCAAGGGGAAGGCCTTTCTGTACCACCACTTTGCCGCGGAGGGTGGCAACATGCAATCGAAGATGGCATTGGCATACAGCTACACGAGGCAGGACATGTTCGACAAAGGTGTAAATCTGTATGGCGAATTAGCCGAAGTGGCCGTGAACAGCTTTCTGATATCGAAGGAGTCTCCTGTGATTGAGGCGGTTAGGCTTCACAACGGGGCAGAGGAGAACAAGGAGGCTCTTAGAAAATCCAAGGGTGAAGAGGACGAGGACTTTCAGATACTTGAGTACCAGGCCCAGAAAGGGAATGCTGCTGCCATGTACAAAGTTGGTCTCTTTTACTACTTTGGCCTCAGGGGTTTGAGGCGTGACCATTCCAAGGCCCTCTGGTGGTTCCTCAAGGCCGTGGACAAGGGAGAGCCTCGATCCATGGAGCTTCTTGGAGAGATCTATGCGAGAGGAGCAGGTGTGGAGAGAAACTACACCAAGGCCTTCGAGTGGCTCACCCTTGCTTCCAGGCACCACCTCTATTCTGCCTACAATGGGATGGGGTATTTGTACGTCAAAGGCTATGGAGTTGACCAGAAGAACTACACCAAGGCCAAAGAGTATTTTGAGAAGGCTGCTGATAATGACGAGGTTGGCGGCCACTATAACCTTGGCGTCATGTATCTCAAGGGGATTGGAGTCAATAGGGATGTTAAGCTCGCCTGTAAGTTCTTTGTTTTCGCCGCTAACCATGGCCAACCAAAGGCCTTCTACCAGCTCGCTAAGATTTTCCATACTGGTCTTGGCTTCAAGAAGAATATTCCTTTGGCAACTGCACTTTACAAACTAGTTGCAGAGCGGGGTCCATGGAGTTCTTTGTCTAGATGGGCTCTAGAATCATACTTAAAAGGTGATGTTGGCAAGGCATTTATGTTGTATTCAAGAATGGCTGAGATGGGCTATGAAGTGGCACAAAGTAACGCTGCTTGGATTCTTGACAAATATGGGGAACGCAGCATGTGCATGGGTGAATCTGGATTTTGCACTGATGCAGAAAGGCATCAGCGGGCACATTCTCTGTGGTGGCAAGCTTCTGAGCAGGGTAATGAACATGCTGCTTTACTCATTGGAGATGCATATTACTATGGTCGGGGTACTGCCAGGGATTATGAGCGAGCTGCTGAGGCTTATATGCATGCTAAATCACAATTGAACGCGCAAGCCATGTTCAATCTTGGATACATGCATGAGCATGGCCAAGGACTTCCATATGACCTTCATCTGGCCAAGCGTTACTATGATGAAGCTCTAGAGCATGATTCTGCAGCCAAGTTGCCGGTCACGCTGGCTCTTTCAAGCCTGTGGGTTCGTAAGAACTATGCTGACAGTTTCATGGTACAGGTAATTGATTCATTGCCTGAACTGTATCCTAAATTAGAAGCTTGGGTGGAGAATGTGCTTTTGGAGGAGGGAAATGCTACAATTCTGACCCTCTTTGTATGCCTCTTAACTGTGCTGTATCTACGTGAGAGGCAACGAAGGCAAGCTGCCGTTGCAGCTGGAGAGGTGGCTCAGCCAAATCGCCCAAATGAGCTTGGTGCACCCATGTAG 2274 0.515 MNFNGINSRSLLPGQSDPQSETENNWAGPNFTKKDELSKVTWQIPSGAENVASEVEDYNCNNTPSIAFPILFAIPIVVIRTTQHNTMAGPNPIPKWLFLSLTLILSLSVSVGARHFVLVLSQEDYKDDPPADPDSAAEWDEFGDGDSHKSEDDLDPGSWRPIFEPPAGDPQPLPESDAAYHSAVHKLMSGDPDLIQDGAAEIGALAETGHPASQSVLGFLWGMGLLRERSKGKAFLYHHFAAEGGNMQSKMALAYSYTRQDMFDKGVNLYGELAEVAVNSFLISKESPVIEAVRLHNGAEENKEALRKSKGEEDEDFQILEYQAQKGNAAAMYKVGLFYYFGLRGLRRDHSKALWWFLKAVDKGEPRSMELLGEIYARGAGVERNYTKAFEWLTLASRHHLYSAYNGMGYLYVKGYGVDQKNYTKAKEYFEKAADNDEVGGHYNLGVMYLKGIGVNRDVKLACKFFVFAANHGQPKAFYQLAKIFHTGLGFKKNIPLATALYKLVAERGPWSSLSRWALESYLKGDVGKAFMLYSRMAEMGYEVAQSNAAWILDKYGERSMCMGESGFCTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYGRGTARDYERAAEAYMHAKSQLNAQAMFNLGYMHEHGQGLPYDLHLAKRYYDEALEHDSAAKLPVTLALSSLWVRKNYADSFMVQVIDSLPELYPKLEAWVENVLLEEGNATILTLFVCLLTVLYLRERQRRQAAVAAGEVAQPNRPNELGAPM 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00526 757 Coils Coil 608 628 - -
Gma08g00526 757 SUPERFAMILY HCP-like 310 436 - -
Gma08g00526 757 SMART sel1 402 438 IPR006597 -
Gma08g00526 757 SMART sel1 366 401 IPR006597 -
Gma08g00526 757 SMART sel1 211 246 IPR006597 -
Gma08g00526 757 SMART sel1 591 626 IPR006597 -
Gma08g00526 757 SMART sel1 627 662 IPR006597 -
Gma08g00526 757 SMART sel1 439 474 IPR006597 -
Gma08g00526 757 SMART sel1 329 365 IPR006597 -
Gma08g00526 757 SMART sel1 475 510 IPR006597 -
Gma08g00526 757 SUPERFAMILY HCP-like 205 276 - -
Gma08g00526 757 MobiDBLite consensus disorder prediction 141 158 - -
Gma08g00526 757 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 95 742 - -
Gma08g00526 757 Gene3D Tetratricopeptide repeat domain 199 287 IPR011990 GO:0005515
Gma08g00526 757 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 95 742 IPR044623 GO:0030433
Gma08g00526 757 SUPERFAMILY HCP-like 522 662 - -
Gma08g00526 757 MobiDBLite consensus disorder prediction 1 32 - -
Gma08g00526 757 SUPERFAMILY HCP-like 420 550 - -
Gma08g00526 757 Pfam Sel1 repeat 329 364 IPR006597 -
Gma08g00526 757 Pfam Sel1 repeat 213 246 IPR006597 -
Gma08g00526 757 Pfam Sel1 repeat 593 615 IPR006597 -
Gma08g00526 757 Pfam Sel1 repeat 403 437 IPR006597 -
Gma08g00526 757 Pfam Sel1 repeat 627 662 IPR006597 -
Gma08g00526 757 Pfam Sel1 repeat 479 509 IPR006597 -
Gma08g00526 757 Pfam Sel1 repeat 524 542 IPR006597 -
Gma08g00526 757 Pfam Sel1 repeat 442 473 IPR006597 -
Gma08g00526 757 Pfam Sel1 repeat 367 399 IPR006597 -
Gma08g00526 757 MobiDBLite consensus disorder prediction 124 176 - -
Gma08g00526 757 Gene3D Tetratricopeptide repeat domain 515 675 IPR011990 GO:0005515
Gma08g00526 757 Gene3D Tetratricopeptide repeat domain 404 514 IPR011990 GO:0005515
Gma08g00526 757 Gene3D Tetratricopeptide repeat domain 288 403 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00526 Gma-Chr8 4322617 4325966 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00526 K14026 - gmx:100787823 1510.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00526 08 4322617 4325966 Gma08g00526 08 4322617 4325966 ECH
Gma05g02389 05 44695666 44698477 Gma08g00526 08 4322617 4325966 GST