Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00525 ATGACATTAAAGCGTATAGGCAGATGCTCGAGGATGCTGGATTTGATGATGTCATTGCTGAGGATCGAACTGATCGGTTCGTTGAAACATACACTACAGCAGGAGTTAGATGCCCTTGAGAACAAGAAGGGCGATTTTATTCGTGACTTCAGCGAAGAAGACTACAATGAGATTGTGGAAAGATGGAAGGCAAAGCAGACCAGGGGTGCATCTAGAGAGCAGATGTGGGATTTATGTTGTTGCATGAGAATAATTGATGAAACAAATCACCAAATCGCCATGGCTGTTAACATTTTTGAGGAAAATGTAGAAAGACTTCCCCGTGTTGCTGCTGTTGGGGATGTAATTGTGCTTTGTTGTGTTGAGGTAAAATCATTTAAAGGGGAAGTAAATGCTACTTTCGATAAGAGATTTTCATCTTTTGGTTTATATAAAGGCAAAGATGGTGATGATTTGGATCCTTATCATGTTTCTTCTTATTTTCACCACATACGTGAAGATGAGAGCTTAATAGTTAAGCTTAGAAAATGGCTGATGAATTTTCAGCCTCACGAAGATTCATGTAATTTCCCCATGTTAAGAGAAATCAAGGAAGAAACTTCTGTTAATTTGGCATGCAAGATCCTTCATTTTTGTGAGGCTGCTAAAGATGAGTGGATTATATTTGCTTGGGATGGTACTAACACTCCACCAAATGTCATATGTTCAAAGCTTGAAGAAGAAATTAACTCTCCACTTCCTCTACAACTAGAACCCTTGCCTTTGTCAAGAGAGGTTTTATGTACTTTGCCCGTTGTTGGATCCATCTTGAGGATGACGTTTGATGCAGACCTTGTGAAAAATCATTTACACCTTTTAAATGTTGATAAATGGGTCAAGTTTATGAATATGCGTCTTAAGGTGGTTGATGGACTATGGCTCGGCGTTTTTACCCCTCAATCAAAGCTTCAATATACACCAAATGAGGACGGTCTGATTGTTGAACGTCAAAGGTTGTCTGAAGAGTGGCTATTCCCTAAGCCTTCATTTATTACAGAAGAAGTTAATCAAGATCATGCTATCCCTGTTACTTTAATGACTGTCCTCACTCATTCAGAGGTGACTGCTAAATTCAAGTGTGTTGTTCGAGTGGTAGCAGCAACGCCATGCCAAGCTGAAAATCTGTTATCTAGTACTGGGGAATATAGAATGCGGCTTACACTAGAGGATTCAACAGCTAGAATTCATGCTTTTGTAACTGCCAAGGATGGGGAGGTTCTTTTTGATGGTTATCCGGACATTGATGAGTTGACAAGGAAGCTAAACATATTACTTGGAGTAAATGAGGTAAAGGATGCTCCAAGAAATCCACCATGGGTTTGTGTTTGTCTCAAGTCATTTTGTGTCTCCAAAACTGATGTATGGAGCAGTAGAACCTTTAAAATATTTGACACCAAAATAGTGGGAGATACATGA 1455 0.3938 MTLKRIGRCSRMLDLMMSLLRIELIGSLKHTLQQELDALENKKGDFIRDFSEEDYNEIVERWKAKQTRGASREQMWDLCCCMRIIDETNHQIAMAVNIFEENVERLPRVAAVGDVIVLCCVEVKSFKGEVNATFDKRFSSFGLYKGKDGDDLDPYHVSSYFHHIREDESLIVKLRKWLMNFQPHEDSCNFPMLREIKEETSVNLACKILHFCEAAKDEWIIFAWDGTNTPPNVICSKLEEEINSPLPLQLEPLPLSREVLCTLPVVGSILRMTFDADLVKNHLHLLNVDKWVKFMNMRLKVVDGLWLGVFTPQSKLQYTPNEDGLIVERQRLSEEWLFPKPSFITEEVNQDHAIPVTLMTVLTHSEVTAKFKCVVRVVAATPCQAENLLSSTGEYRMRLTLEDSTARIHAFVTAKDGEVLFDGYPDIDELTRKLNILLGVNEVKDAPRNPPWVCVCLKSFCVSKTDVWSSRTFKIFDTKIVGDT 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00525 484 PANTHER PROTECTION OF TELOMERES 1 68 481 IPR028389 GO:0000723|GO:0043047
Gma08g00525 484 SMART Telo_bind_a_2 55 179 IPR011564 GO:0000723|GO:0000781|GO:0003677
Gma08g00525 484 SUPERFAMILY Nucleic acid-binding proteins 77 181 IPR012340 -
Gma08g00525 484 Coils Coil 22 49 - -
Gma08g00525 484 Pfam Telomeric single stranded DNA binding POT1/CDC13 77 178 IPR011564 GO:0000723|GO:0000781|GO:0003677
Gma08g00525 484 Gene3D - 63 188 IPR012340 -
Gma08g00525 484 SUPERFAMILY Nucleic acid-binding proteins 193 303 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00525 Gma-Chr8 4316741 4322076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00525 32 83 Acyl Lipid Metabolism Gene Families AT1G73600 50.000 8.78e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00525 - - gmx:100800003 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00525 08 4316741 4322076 Gma08g00525 08 4316741 4322076 ECH
Gma05g02388 05 44691150 44695009 Gma08g00525 08 4316741 4322076 GST