Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00513 ATGGCCATGATGGGCTCAATGCTGCTCAGTCTCAGACCCTTTCTCACCACCATCTTCTTTCTCACACTCACAGTGCTCAAGGTTTCAGCATCATCCTCAGTGATTTTCTACAACAAGTGCCAGCACCCAGTGTGGCCCGGGATCCAGCCCAGCGCAGGAAAGCCCGTTCTGGCCCGCGGAGGCTTCAAGCTCGCCCCAAACCGGGCCTACTCCCTCCAGCTCCCCGCTCTATGGTCCGGGCGCTTCTGGGGCCGCCACGGCTGTTCCTTCGACGCCGGCGGCCGGGGGCGCTGCGCCACCGGGGACTGCGGCGGGTCCCTGTTCTGCAACGGCATCGGCGGAAGCCCACCGGCGACCCTGGCGGAGTTCACCCTGGGCAACGAGCAGGACTTCTACGACGTGAGCCTGGTGGACGGGTACAACCTACCCATCTCCATCACCCCCTTCAAGGGATCCGGAAAATGCAGCTACGCCGGGTGCGTGAGCGACCTCAACACCATGTGCCCCGTTGGCCTCCAAGTGCGCTCACGCGACAACAAGCGCGTGGTGGCCTGCAAGAGCGCTTGCTCCGCTTTCAACTCCCCCAGGTACTGCTGCACGGGCTCCTATGGAAGCCCACAGGCCTGCAAGCCCACCGTCTATTCCAAGATCTTCAAGACCGCATGCCCCAAGGCCTACTCCTATGCCTATGATGACCCCACCAGCATCGCTACTTGCACCAAAGCTAACTATTTGGTCACCTTCTGCCCCCATCGCCGCTAG 762 0.6207 MAMMGSMLLSLRPFLTTIFFLTLTVLKVSASSSVIFYNKCQHPVWPGIQPSAGKPVLARGGFKLAPNRAYSLQLPALWSGRFWGRHGCSFDAGGRGRCATGDCGGSLFCNGIGGSPPATLAEFTLGNEQDFYDVSLVDGYNLPISITPFKGSGKCSYAGCVSDLNTMCPVGLQVRSRDNKRVVACKSACSAFNSPRYCCTGSYGSPQACKPTVYSKIFKTACPKAYSYAYDDPTSIATCTKANYLVTFCPHRR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00513 253 SUPERFAMILY Osmotin, thaumatin-like protein 34 251 IPR037176 -
Gma08g00513 253 ProSiteProfiles Thaumatin family profile. 31 252 IPR001938 -
Gma08g00513 253 PRINTS Pathogenesis-related protein signature 33 45 IPR001938 -
Gma08g00513 253 PRINTS Pathogenesis-related protein signature 81 92 IPR001938 -
Gma08g00513 253 PRINTS Pathogenesis-related protein signature 94 123 IPR001938 -
Gma08g00513 253 PRINTS Pathogenesis-related protein signature 130 146 IPR001938 -
Gma08g00513 253 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Gma08g00513 253 ProSitePatterns Thaumatin family signature. 94 109 IPR017949 -
Gma08g00513 253 PIRSF PR5 1 253 IPR001938 -
Gma08g00513 253 PANTHER THAUMATIN-LIKE PROTEIN 22 252 - -
Gma08g00513 253 SMART tha2 34 250 IPR001938 -
Gma08g00513 253 Gene3D Thaumatin 33 250 IPR037176 -
Gma08g00513 253 CDD TLP-PA 36 249 - -
Gma08g00513 253 PANTHER OS03G0233200 PROTEIN 22 252 IPR001938 -
Gma08g00513 253 Pfam Thaumatin family 38 250 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00513 Gma-Chr8 4234198 4235431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00513 3 251 Receptor kinase-like Gene Family AT5G38280 44.141 4.55e-63 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00513 - - gmx:100784636 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00513 08 4234198 4235431 Gma08g00513 08 4234198 4235431 ECH
Gma05g02380 05 44640382 44641391 Gma08g00513 08 4234198 4235431 GST