Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02380 ATGCCGACTCTTAGACCCATTCTCACCACCATCTTCTTCCTCTTCACAGTGCTCAAGGTTTCAGCATCATCGTCAGTGATATTCTACAACAAGTGCCCCCACCCAGTGTGGCCCGGGATCCAGCCCAGCGCAGGAAAGCCCGTTCTGGCCCGCGGAGGCTTCAAGCTCGCCCCAAACCGGGCCTACTCCCTCCAGCTACCCGCCCTCTGGTCCGGGCGCTTCTGGGGCCGCCACGGCTGCGCCTTCGACGTCGGCGGGCGCGGGCGCTGCGCCACCGGTGACTGCGGCGGGTCCCTCTTCTGCAACGGCATCGGGGGAAGCCCACCGGCGACCCTGGCGGAGTTGACCCTGGGCAACGAGCAGGACTTCTACGACGTGAGCCTGGTGGACGGCTACAACCTGCCCATCTCCATCACCCCATTCAAGGGATCCGGAAAATGCAGCTACGCGGGCTGCGTGAGCGACCTGAACACCATGTGCCCCGTGGGCCTCCAAGTTCGCTCACGCGACAACAAGCGCGTGGTTGCCTGCAAGAGCGCTTGCTCCGCTTTCAACTCCCCCAAGTACTGCTGCACCGGCTCCTATGGAAGCCCACAGGCCTGCAAGCCCACCGTCTATTCCAAGATCTTCAAGACCGCATGCCCCAAGGCCTACTCCTATGCCTATGATGACCCCACCAGCATTGCTACTTGCACCAAAGCTAACTATTTCCTCACCTTCTGCCCCCATCGCCCCTGA 738 0.622 MPTLRPILTTIFFLFTVLKVSASSSVIFYNKCPHPVWPGIQPSAGKPVLARGGFKLAPNRAYSLQLPALWSGRFWGRHGCAFDVGGRGRCATGDCGGSLFCNGIGGSPPATLAELTLGNEQDFYDVSLVDGYNLPISITPFKGSGKCSYAGCVSDLNTMCPVGLQVRSRDNKRVVACKSACSAFNSPKYCCTGSYGSPQACKPTVYSKIFKTACPKAYSYAYDDPTSIATCTKANYFLTFCPHRP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02380 245 Pfam Thaumatin family 30 242 IPR001938 -
Gma05g02380 245 PIRSF PR5 2 245 IPR001938 -
Gma05g02380 245 SMART tha2 26 242 IPR001938 -
Gma05g02380 245 PANTHER OS03G0233200 PROTEIN 16 244 IPR001938 -
Gma05g02380 245 ProSitePatterns Thaumatin family signature. 86 101 IPR017949 -
Gma05g02380 245 SUPERFAMILY Osmotin, thaumatin-like protein 26 243 IPR037176 -
Gma05g02380 245 Gene3D Thaumatin 25 242 IPR037176 -
Gma05g02380 245 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Gma05g02380 245 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Gma05g02380 245 PRINTS Pathogenesis-related protein signature 86 115 IPR001938 -
Gma05g02380 245 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Gma05g02380 245 PRINTS Pathogenesis-related protein signature 232 241 IPR001938 -
Gma05g02380 245 PANTHER THAUMATIN-LIKE PROTEIN 16 244 - -
Gma05g02380 245 CDD TLP-PA 28 241 - -
Gma05g02380 245 ProSiteProfiles Thaumatin family profile. 23 244 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02380 Gma-Chr5 44640382 44641391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02380 8 243 Receptor kinase-like Gene Family AT5G38280 44.490 1.93e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02380 - - gmx:100777800 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02380 05 44640382 44641391 Gma05g02380 05 44640382 44641391 ECH
Gma05g02380 05 44640382 44641391 Gma08g00513 08 4234198 4235431 GST