Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00492 ATGGCGGATGGAAGCAGCGGGGAAATTCTAATGCTGGAAGCCCCAGCGTCTTACGGTAGGTCTAGCGATTCCGACGCGGAAATAATCGACGCATTGCCTTATATCGACGACGACTACGCAGACCCCAGAGTCAAACTGGAGGTTGACCGTCTCGTGGAGGATGAGATGCGTCGCAGCACCAAGAAGCCCACCGATTTCCTCAATGATTTCCCTCCTCTTCCCAACTCCATTTTCCAGAACTACCCAATGATTGCCAGAGAGTACGAACGTGTGAGAGCTGGAAGGCCTCCCGTTGCTCTTGATAGATCGCGCTACGATTTGGAAATGCCGCCGCCCAATAAAAGGAACGACGAAACTGCTTGGAAGCAAGCTCTTCATAGAGCTCAACGCCTGCTGCAATATCAGATCATCAGGATGGAAAATTTGGACTTGATGTTAAAATATGGTCCCGATACCTGGAAACAGCACAACCAGAGATTGGAAGTATACTTGTCAAGAATGCAGAAATTAGCTCAGGAACAAAATGAAAAGATTGAAAAAGTAAACCGTGAAAGGAAATATCATCAGCAAAACACTGCATATGAGCTTAATGCGTTGTCCATGCAATGGAAGGAGCTTTGTCAGAAGAATATAGACATCAGTGCTGCCTGTGCTTCAGTTGAAAATCGCATAAATGAACTGAAAAGAGAAGCAGCAGAAAGAGGCTGGAACTTGGGAGCTGTAACAGAAAATGACCAATTGGCAAATTCCGAATTATGA 759 0.4598 MADGSSGEILMLEAPASYGRSSDSDAEIIDALPYIDDDYADPRVKLEVDRLVEDEMRRSTKKPTDFLNDFPPLPNSIFQNYPMIAREYERVRAGRPPVALDRSRYDLEMPPPNKRNDETAWKQALHRAQRLLQYQIIRMENLDLMLKYGPDTWKQHNQRLEVYLSRMQKLAQEQNEKIEKVNRERKYHQQNTAYELNALSMQWKELCQKNIDISAACASVENRINELKREAAERGWNLGAVTENDQLANSEL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00492 252 Coils Coil 210 230 - -
Gma08g00492 252 Coils Coil 157 191 - -
Gma08g00492 252 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 27 233 IPR008409 GO:0006397
Gma08g00492 252 PANTHER PRE-MRNA-SPLICING FACTOR SPF27 20 235 - -
Gma08g00492 252 PANTHER BCAS2 PROTEIN 20 235 IPR008409 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00492 Gma-Chr8 4084794 4087073 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00492 K12861 - gmx:100777152 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00492 08 4084794 4087073 Gma08g00492 08 4084794 4087073 ECH
Gma05g02362 05 44495479 44498185 Gma08g00492 08 4084794 4087073 GST