Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02362 ATGGCGGATGGAAGCAACGGGGGAGTTCTAATGCTGGAAGCCCCACCGTCTTACGGTAGGCCTACCGGTTCTAACGCGGAAATAATCGACGCATTGCCTTACATTGATGACGACTACGCAGACCCCAGAGTCAAACTTGAGGTTGACCGTCTCGTGGAGGATGAGATGCGTCGCAGCACCAAGAAGCCCACCGATTTCCTCAAAGATTTCCCTCCTCTTCCCAACTCCAATTTCCAGCAGAACTACCCAATGATTGCGAGAGAGTACGAACGTGTGAGAGCCGGAAGACCTCCCGTTGCTCTTGATAGATCGCGCTACGAATTGGAAATGCCGCCGGCGAATAAAAGGAACGACGAAACTGCTTGGAAGCAAGCTCTTCATAGAGCTCAACACCTGCTGCAATATCAGATTATGAGGATGGAAAATTTGGATTTGATGTTAAAATATGGTCCCGATACCTGGAAACAACACAACCAAAGATTGGAAGTATACTTATCAAGAATGCAGAAATTAGCTCAGGAACAAAATGAAAAGATTGAAAAAGTAAACCGTGAAAGGAAATATCATCAGCAAAACACTGCATATGAGCTTAATGCGTTGTCCATGCAATGGAAGGAGCTTTGTCAGAAGAATATAGACATCAGTGCTGCCTGTGCTTCAGTTGAAAATCGCATAAATGAATTGAAAAGAGGAGCAGCAGAAAGAGGCTGGAACTTGGAAGCTGTAACTGAAAATGGCCAATTGGCAAAATCCGAATTATGA 762 0.4514 MADGSNGGVLMLEAPPSYGRPTGSNAEIIDALPYIDDDYADPRVKLEVDRLVEDEMRRSTKKPTDFLKDFPPLPNSNFQQNYPMIAREYERVRAGRPPVALDRSRYELEMPPANKRNDETAWKQALHRAQHLLQYQIMRMENLDLMLKYGPDTWKQHNQRLEVYLSRMQKLAQEQNEKIEKVNRERKYHQQNTAYELNALSMQWKELCQKNIDISAACASVENRINELKRGAAERGWNLEAVTENGQLAKSEL 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02362 253 PANTHER BCAS2 PROTEIN 22 236 IPR008409 GO:0006397
Gma05g02362 253 Coils Coil 158 192 - -
Gma05g02362 253 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 27 234 IPR008409 GO:0006397
Gma05g02362 253 PANTHER PRE-MRNA-SPLICING FACTOR SPF27 22 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02362 Gma-Chr5 44495479 44498185 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02362 K12861 - gmx:100783349 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02362 05 44495479 44498185 Gma05g02362 05 44495479 44498185 ECH
Gma05g02362 05 44495479 44498185 Gma08g00492 08 4084794 4087073 GST