Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00476 ATGCGTAATGCGTTAATGGCCACCACCCTTTCCTTCTCCTTTCCCAGCTTCCAAAGTACTCCACCATCAACAATAACAAGACACCCCAGAAGAGTATCAATCTCATGCCACTCATCACCCTCCAACTCCAACAATGACCCTATCCGCGTGGCGTTCTCCGGCGACGGCACCGGCAGCAACGTGTATCCTGCGTTGGCCATCGCGGAGGAGCTCAAAACCGCCAACCCCACGTGCCAGTTCCTCTTCTTGGGCACCCCCAACAGCGTGGAAAGCGCCGCAATCTCCTCCGCAGGCTACGACTTCGCCTCTGTCTCTTCACCACCCCAAAACCTGGTCTTCTTCCCTCAACGTCTCTTGAAGTCTCTCATCCAATGTCTCTGCCACCTCCGAGACTTCCAACCGCACGTGGTTGTCGGCACCGGCGGCTACGTCTCTTTCCCCGCCTGCATCGCTGCCAAGCTCAGAGGCGGCACCAACGTTGTCATCCACGAACCCAACTCTGTCCCTGGCTTCGCCAACTCTCTTCTTTCGTTCCTCGCTGATGCCATCTTCGTTGCTTTTAACTCCACACTCGATAGTTTCCCGAGGAACAAGTGTCTG 600 0.56 MRNALMATTLSFSFPSFQSTPPSTITRHPRRVSISCHSSPSNSNNDPIRVAFSGDGTGSNVYPALAIAEELKTANPTCQFLFLGTPNSVESAAISSAGYDFASVSSPPQNLVFFPQRLLKSLIQCLCHLRDFQPHVVVGTGGYVSFPACIAAKLRGGTNVVIHEPNSVPGFANSLLSFLADAIFVAFNSTLDSFPRNKCL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00476 200 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 49 192 - -
Gma08g00476 200 Gene3D Glycogen Phosphorylase B; 43 200 - -
Gma08g00476 200 PANTHER UDP-N-ACETYLGLUCOSAMINE--N-ACETYLMURAMYL-(PENTAPEPTIDE) PYROPHOSPHORYL-UNDECAPRENOL N-ACETYLGLUCOSAMINE TRANSFERASE 1 49 199 - -
Gma08g00476 200 CDD GT28_MurG 49 198 - -
Gma08g00476 200 Pfam Glycosyltransferase family 28 N-terminal domain 50 184 IPR004276 GO:0005975|GO:0016758|GO:0030259
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00476 Gma-Chr8 3957596 3958195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00476 37 200 Glycosyltransferase AT1G73740 42.373 9.11e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00476 K02563 - gmx:100808262 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00476 08 3957596 3958195 Gma08g00476 08 3957596 3958195 ECH
Gma05g02346 05 44377006 44382789 Gma08g00476 08 3957596 3958195 GST