Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02346 ATGTTAATGGCAACCACCCTTTCCTTCTCCTTTCCCGTGTTCCAAAGCACTCCACTATCCAGAAGAGTCTCAATCTCATGCCACTCATCCAACTCCAACAACGAGACTCTCCGCGTGGCCTTCGCCGGCGGCGGCACCGGCAGCAACGTGTACCCGGCGGTGGCCATCGCGGAGGAGCTGAAAACCGCCAACCCCACGTGCCAGTTTCTCTTCCTCTGCACCCCCAACAGCGTGGAAAGCACCGCAATCTCCTCCGCAGGCTACGACTTCGCCTCTGTCTCTTCACCACCCCAAAACCTTCTCTTCTTCCCTCACCGTCTCTTCAAGTCTCTGATCCAATGCCTCTGCCACCTCCGACACTTCCAACCCGACGTTGTTGTCGGCACCGGCGGCTACGTCTCTTTCCCCGCCTGCCTCGCTGCCAAGCTCAGAGGCACCAACGTTGTCATCCACGAACCCAACTCTGTCCCCGGCTTCGCCAACTCTCTTCTTTCCTTCTTCGCTGATGCCATCTTCGTTGCTTTTAACTCCACACTCGATAGTTTCCCGAGGAACAAGTGTTTCGTGTGTGGGAACCCGGTGAGGTTGTCTATTAGGAACCTCGTTTCCAAGGTGACCGCCATGTCTCATTTTTTCCCCGGTTCGGATAGTGGGAGCAGGATTTTGTTGGTGCTTGCGGGATCTTTTGGCGCCAATGCAGTTAACATTGCGATGCTGAATTTGTATTATCAGATGCTGAGACAGGATAGTGGCTTGTATGTTATTTGGCAAactggggttgaagcctttgatgaaatggatagtcttgttaaaactcatccacgcttGTATATCACACCGTTCATGCATTGTATGGGTTTGGCATATGCAGCAGCAGACTTGATTGTCTCCAGAGCAGGTGCAATGACTTGCTATGAAATATTGGCAACAGGGAAACCATCTATCCTGATACCCTCGCCAAATTTCTCTGAGGGGAATCAGTTCAGAAATGCTTCCTTGATGGCAGATTTAGCTGGTGTGACTGTTATAACTGAGGATGAGCTAGACTCAAGTACTCTAGCCATTGCAATTGAAAAGATTTTAAGGGACAAGAAGAAGATGGAAGATATGTCTGAGAGGGCTCTGAAGGCTGCAAACCCCAATGCCTCAGCAGAGATTGCAAAACACATTCTCTCCCTTGTAAATCTATCTACCAAAGAGAAAAGAAATATGGCAACAAAGTAG 1224 0.4804 MLMATTLSFSFPVFQSTPLSRRVSISCHSSNSNNETLRVAFAGGGTGSNVYPAVAIAEELKTANPTCQFLFLCTPNSVESTAISSAGYDFASVSSPPQNLLFFPHRLFKSLIQCLCHLRHFQPDVVVGTGGYVSFPACLAAKLRGTNVVIHEPNSVPGFANSLLSFFADAIFVAFNSTLDSFPRNKCFVCGNPVRLSIRNLVSKVTAMSHFFPGSDSGSRILLVLAGSFGANAVNIAMLNLYYQMLRQDSGLYVIWQTGVEAFDEMDSLVKTHPRLYITPFMHCMGLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNFSEGNQFRNASLMADLAGVTVITEDELDSSTLAIAIEKILRDKKKMEDMSERALKAANPNASAEIAKHILSLVNLSTKEKRNMATK 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02346 407 Hamap UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 39 394 IPR006009 GO:0050511
Gma05g02346 407 Gene3D Glycogen Phosphorylase B; 41 384 - -
Gma05g02346 407 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 38 395 - -
Gma05g02346 407 CDD GT28_MurG 38 389 - -
Gma05g02346 407 Gene3D Glycogen Phosphorylase B; 194 378 - -
Gma05g02346 407 PANTHER UDP-N-ACETYLGLUCOSAMINE--N-ACETYLMURAMYL-(PENTAPEPTIDE) PYROPHOSPHORYL-UNDECAPRENOL N-ACETYLGLUCOSAMINE TRANSFERASE 1 37 393 - -
Gma05g02346 407 PANTHER GLYCOSYLTRANSFERASE 37 393 - -
Gma05g02346 407 Pfam Glycosyltransferase family 28 N-terminal domain 39 172 IPR004276 GO:0005975|GO:0016758|GO:0030259
Gma05g02346 407 Pfam Glycosyltransferase family 28 C-terminal domain 222 379 IPR007235 GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02346 Gma-Chr5 44377006 44382789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02346 28 399 Glycosyltransferase AT1G73740 50.386 7.18e-127 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02346 K02563 - gmx:100808262 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02346 05 44377006 44382789 Gma05g02346 05 44377006 44382789 ECH
Gma05g02346 05 44377006 44382789 Gma08g00476 08 3957596 3958195 GST