Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00398 ATGCTGCTATGTCCCAAAGAAGAAGCACTTGTTAAACTCTTCTACAATGTCGTCTCAAGCCCTTTCCAGCTTCTCTTCCTCATTCTCTTCTCCTCTTCCGTTTTCCTTGTCACCTTCTTAACCTTCACAGGCAGATTCCCCTTAATCCAAAGGGATCAAGAGTATGAATATGTGTATACCgaggatgaagaagaagaggaagaagaagaaAATCAAGAAGGGTATTCTTGTGTTGATTCTAACGAGAGATTACAAGTCACTTGTGGCAAGGAGACTCATGTGTTTCTGCAGAATGATGAGGGGCATCAGAGGACTCATTCTTATTCGGAAGAATTCATAAGCCATGAGGAGAGCTTGAATGAAGAAGAGTCAGAAGAAAAGCATTATTCTGAAATGTTGTCTCTCCATAACTCACCACAAGTTTCTGACTTGGAAAATGAAGAGGTGGAAACGATTCAAGTAGACTTTCCAGAGAGAGATCCTGATTCTGTTCCAAATTCTGCCCAAGTTGAAAGAAGGACCACCTCTCCCATCAGCCTCAGCGCATACAAAAGAAACAAAAACCGTGACGACGATCATGTTAGCATTGAAATTATTAAAAACAAGAAAGTGCAAGAGACAAACCTTGCAAGGGATGAGAGATTCTTTGTTTTTGCTTCTACCCAATTGCAGAGTAAGAAGTTAATGATTGAAGAGAAGGATGATGAGTCCTCTAAATGGAAGAGCTCCATCATTGGCAGGGACTCTGATACTGAAGATGAGTTTTCTTGCTCATCAAGAAGTTGCCCCAAGTGGGAATCATACACATTGTTCCAAAAGTATGATGAAGAGATGGCAATCCTAGACAGAATTAGTGCACAGAAGCTTCATGAAACTGAGTCATTAAGGTCCATCCAAATGTCTCCAAGATCAATGTCTGAGCGTATTGTGTATAAGTTTCAAAATATGAATAAAAAGCCCGCTGAGGCTGGTCACAACCCATATCATGAACTAGAGGCTGCATATGTTGCACAAATTTGTTTAACATGGGAAGCCCTTAGTTGGAACTACAAAAACTTTCGTTCCAAACACGCCTCACACCAGGATCATGATACCGGTTGTTCTGCCACCGTTGTGCAGCAATTCCAGCAATTTCAGGTTCTGTTACAGAGATACATTGAGAATGAGCCTTATGAGAATGGCAGGAGACCTGAGATCTTTGCTAGAATGAGGCTTTTGGCGCCAAAGTTACTCCTAGTGCCAGAATATCAAGATTTAGAGGAGGATCAGAAGGATGGTGGTTTTCAATGCAAAATATCATCTGCTTCATTTCTAAAGATAATGGAGGACGGGATAAAGACATTCATGAATTTTCTGAAGAATGATAAAGAGAAGCCTTGTCAGATCCTTGCAGCCTACTTTAGGAGAAAACAAAGAGGCACAGTTGATCCAACACTACTCCGACTAATGAAGAAGAAGAGGGTGAAGGTTAAGGATCTTAACCATGCAGGGAAATGCTTGAGGAAGAGAAAGTTAAAGGTGGAAAAGGATATGGATATTTTGATGGCACTCATAGACCTAAAAGTGGTGTCGAGGGTTTTAAGAATGAATGACTTGAGTGAAGAGCAGTTGCACTGGTGTGAGGAGAAGATGAGCAAAGTGAGAATCATGGAAGGGAAACTTCAAAGAGATTATTCCACCCCACTTTTCTTCCCCTCACATTGA 1704 0.4043 MLLCPKEEALVKLFYNVVSSPFQLLFLILFSSSVFLVTFLTFTGRFPLIQRDQEYEYVYTEDEEEEEEEENQEGYSCVDSNERLQVTCGKETHVFLQNDEGHQRTHSYSEEFISHEESLNEEESEEKHYSEMLSLHNSPQVSDLENEEVETIQVDFPERDPDSVPNSAQVERRTTSPISLSAYKRNKNRDDDHVSIEIIKNKKVQETNLARDERFFVFASTQLQSKKLMIEEKDDESSKWKSSIIGRDSDTEDEFSCSSRSCPKWESYTLFQKYDEEMAILDRISAQKLHETESLRSIQMSPRSMSERIVYKFQNMNKKPAEAGHNPYHELEAAYVAQICLTWEALSWNYKNFRSKHASHQDHDTGCSATVVQQFQQFQVLLQRYIENEPYENGRRPEIFARMRLLAPKLLLVPEYQDLEEDQKDGGFQCKISSASFLKIMEDGIKTFMNFLKNDKEKPCQILAAYFRRKQRGTVDPTLLRLMKKKRVKVKDLNHAGKCLRKRKLKVEKDMDILMALIDLKVVSRVLRMNDLSEEQLHWCEEKMSKVRIMEGKLQRDYSTPLFFPSH 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00398 567 PANTHER DNA LIGASE (DUF1666)-RELATED 4 567 - -
Gma08g00398 567 PANTHER DUF1666 FAMILY PROTEIN 4 567 - -
Gma08g00398 567 Pfam Protein of unknown function (DUF1666) 330 565 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00398 Gma-Chr8 3357627 3360452 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00398 - - gmx:100820449 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00398 08 3357627 3360452 Gma08g00398 08 3357627 3360452 ECH
Gma05g02274 05 43778717 43781677 Gma08g00398 08 3357627 3360452 GST
Gma08g00398 08 3357627 3360452 Gma07g00834 07 8891101 8894312 PCT
Gma08g00398 08 3357627 3360452 Gma09g01702 09 42672105 42676340 PCT
Gma07g00834 07 8891101 8894312 Gma08g00398 08 3357627 3360452 PCT
Gma09g01702 09 42672105 42676340 Gma08g00398 08 3357627 3360452 PCT