Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02274 ATGCCGCTATGTCCCAAAGAAGAAGCACTTGTTAAACTCTTCTACAATGTCTCTAGCCCTTTCCAGCTTCTCTTCCTCATTCTCTTCTCCTCTGCCGTTTTCCTTGTCACCTTCTTAACCTTCACAGGCAGATTCCCCTTAATCCAAAGGGATCAAGAATATGAATATGTGTATACCGAGGATGAAGAAGAAGAGGAAGAAGAAACTCAAGAAGGGTATTCTTGTGTTGATTCTACTGACAGATTAGAAGTAACTTGTGGCAAGGAGACTCGTGTGTTTCTGCACAATGAGGGGCATCAGAGGACTCATTCTTATTCGGAAGAATTCATAAGCCCCGAGGAGAGCTTGAATGAAGAGTCAGAAGAAAAGCATTATTCTGAAACGTTGTCTCTCCATAACTCAGCACAAGTTTCTGACTTCGAAAATGAAGAAGCGGAAACGGTTCAAGTAGACTTTCCAGCAAGAGATGCCGATTCTGCCCAGGTTGAAAGAAGGACCACCTCTCCCATCAACCTCACCGCATACAAAAGAAACAAAAACCGTGACGACGATCATGTTAGCGTTGAAATTATTAAAAACAAGAAGGTGCAAGAGACAAACCTTGCAAGGGATGAGAGATTCTTTGTTTTTGCTTCTACCCAATTGCAGAGTAAGAAGTTAATGATTGAAGAGAGGGATGATGAGTCCTCGAAATGGAAGAGCTCCATCATTGGCAGGGATTCTGATACTGAAGACGCATTTTCTTCTTCATCAAGAAGAAGTTGCCCCAAGTGGGAATCATACACATTGTTCCAAAAATATGATGAAGAGATGGCAATCCTAGACAGAATTAGTGCACAGAAACATCATGAAACTGAGTCATTAAGGTCCATCCAAATGTCTCCAAGATCAATGTCAGAGCGTATTGTGTACAAGTTTCAAAATGTAAATAAAAAGCCCGCTGAGGTTGGTCACAACCCATATCGTGAACTAGAGGCTGCATATGTTGCACAAATTTGTTTAACATGGGAAGCCCTTAGTTGGAACTACAAAAATTTTCGTTCCAAACATGCCTCACGCCAGGATCATGATACCGGTTGTTCTGCCACCGTTGCACAGCAATTCCAGCAATTTCAGGTTTTGTTACAGAGATACATTGAGAATGAGCCTTATGAGCATGGCAGGAGACCTGAGATCTTTGCTAGAATGAGGCTTTTGGCACCAAACTTGCTCCTAGTGCCAGAATATCAAGATTTAGAGGAGGATCAGAAGGATGATGGTTTTCAATGCAAAATATCATCAGCTTCATTTCTAAAGATAATGGAGGACGGGATCAAGACATTCATGAATTTTCTGAAGAATGATAAAGAGAAACCCTGTCAGATCCTCGCAGCCTGCTTTAGGAGAAACCAAAGAGGCACGGTTGATCCAACACTACTCCGACTAATGAAGAAGGTTAATCAAAAGAGGGTGAAGGTTAAGGATCTTAACCATGCAGGGAAATGCTTGAGGAAGAGAAAGTTAAAGGTGGAAAAGGATATGGATATTTTGATGGCACTCATAGACCTAAAAGTGGTGTCAAGGGTTTTAAGAATGCATGACTTAAGTGAAGAGCAGTTGCACTGGTGTGAGGAGAAGATGAGCAAAGTGAGAATCATGGAAGGGAAACTTCAAAGAGATTATTCCACCCCACTTTTCTTCCCCTCACATTGA 1692 0.4173 MPLCPKEEALVKLFYNVSSPFQLLFLILFSSAVFLVTFLTFTGRFPLIQRDQEYEYVYTEDEEEEEEETQEGYSCVDSTDRLEVTCGKETRVFLHNEGHQRTHSYSEEFISPEESLNEESEEKHYSETLSLHNSAQVSDFENEEAETVQVDFPARDADSAQVERRTTSPINLTAYKRNKNRDDDHVSVEIIKNKKVQETNLARDERFFVFASTQLQSKKLMIEERDDESSKWKSSIIGRDSDTEDAFSSSSRRSCPKWESYTLFQKYDEEMAILDRISAQKHHETESLRSIQMSPRSMSERIVYKFQNVNKKPAEVGHNPYRELEAAYVAQICLTWEALSWNYKNFRSKHASRQDHDTGCSATVAQQFQQFQVLLQRYIENEPYEHGRRPEIFARMRLLAPNLLLVPEYQDLEEDQKDDGFQCKISSASFLKIMEDGIKTFMNFLKNDKEKPCQILAACFRRNQRGTVDPTLLRLMKKVNQKRVKVKDLNHAGKCLRKRKLKVEKDMDILMALIDLKVVSRVLRMHDLSEEQLHWCEEKMSKVRIMEGKLQRDYSTPLFFPSH 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02274 563 PANTHER DNA LIGASE (DUF1666)-RELATED 4 563 - -
Gma05g02274 563 PANTHER DUF1666 FAMILY PROTEIN 4 563 - -
Gma05g02274 563 Pfam Protein of unknown function (DUF1666) 323 561 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02274 Gma-Chr5 43778717 43781677 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02274 - - gmx:100776190 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02274 05 43778717 43781677 Gma05g02274 05 43778717 43781677 ECH
Gma05g02274 05 43778717 43781677 Gma08g00398 08 3357627 3360452 GST
Gma05g02274 05 43778717 43781677 Gma07g00834 07 8891101 8894312 PCT
Gma05g02274 05 43778717 43781677 Gma09g01702 09 42672105 42676340 PCT
Gma07g00834 07 8891101 8894312 Gma05g02274 05 43778717 43781677 PCT
Gma09g01702 09 42672105 42676340 Gma05g02274 05 43778717 43781677 PCT