Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00235 aTGGCAGGTATCGCTGGTACATGTCCTTTAGGAGCATTGCTCAGAAACAGTGTCTCAGAAAACAATGGGAAGATATCTGTGGTTCATTATGAGGGGCTTAGATTGCAGCAGAGAATGCAAATGCCTTCACCAAGCCAGTACATTTCAGCTTCTTCATCAGCTCCAAGATGCAGAACAATCAAGGCCATGGCTTCCCCAACTGTTGGAGCACCAAAGAGAGAAAAGGATCCAAAAAAGCGGGTAGTAATAACAGGAATGGGTCTTGTGTCAGTCTTTGGTAGTGACGTTGATGCCTTTTACAACAAGCTTCTTGAGGGAGAAAGTGGGATAAGCCTAATAGATAGGTTTGATGCCTCAAACTTCTCGGTCCGTTTTGGAGGTCAGATACGTGATTTCTCTTCAGAAGGCTACATTGATGGCAAGAATGACCGGCGCCTTGACAATTGCTGGAGGTATTGCATTGTTGCAGGCAAGAGGGCCCTTGATGATGCCAACCTTGGAAAGCAAGTCCTTGACACTATGGACAAAACAAGAATAGGAGTTCTGGTGGGATCAGGAATGGGAGGTATAACGGCTTTCTCGAATGGTGTGGAAGCTCTTGTACAAAAGGGATATAAGAAAATTACTCCATTTTTCATTCCCTACTCCATCACCAACATGGGTTCTGCCTTGTTGGCTATAGACACAGGCCTAATGGGTCCCAATTATTCAATTTCCACTGCTTGTGCAACGGCAAATTACTGCTTTTGTGCGGCTGCTAATCACATTAGAAAAGGCGAAGCAGATATCATGGTGGTTGGTGGAACTGAGGCTGCAATCATGCCTAGTGGTCTTGGAGGCTTCATTGCTTGCAGGGCTTTGTCTCACAGAAACGAAGACCCCAAGAAGGCTTCAAGACCATGGGACAAAGATCGTGATGGTTTTGTGATGGGTGAAGGCTCTGGTGTGCTGGTAATGGAGAGCTTGGAGAGTGCAACAAAAAGGGGAGCCAAAATAATAGCAGAATATTTGGGGGGTGCCATAACGTGTGATGCTCATCACATGACTGATCCAAGAGCTGATGGTCTTGGAGTTTCATCTTGCATAAGCAAGAGTTTAGAAGATGCTGGAGTTTCTCCTGAAGAGGTGAACTATGTGAATGCTCATGCCACGTCAACACTGGCTGGTGACTTGGCTGAGGTTAATGCAATTAAAAAGGTTTTTAAGGACACATCAGAATTGAAAATGAATGCAACTAAGTCAATGATTGGTCATGGTCTTGGGGCTGCTGGTGGTTTGGAAGCCATAGCAACTATCAAAGCCATAACAACTGGCTGGTTGCATCCAAGCATTAACCTAGATAACTTGGAGGCTAGTGTTACAATTGACACTGTCCCTAACGTTAAGAAGAAGCATGAAGTTAATGTTGGTATATCCAACTCATTTGGATTCGGTGGACACAATTCAGTAGTTGTCTTTGCCCCATTCAGGCCATAA 1476 0.4478 MAGIAGTCPLGALLRNSVSENNGKISVVHYEGLRLQQRMQMPSPSQYISASSSAPRCRTIKAMASPTVGAPKREKDPKKRVVITGMGLVSVFGSDVDAFYNKLLEGESGISLIDRFDASNFSVRFGGQIRDFSSEGYIDGKNDRRLDNCWRYCIVAGKRALDDANLGKQVLDTMDKTRIGVLVGSGMGGITAFSNGVEALVQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFCAAANHIRKGEADIMVVGGTEAAIMPSGLGGFIACRALSHRNEDPKKASRPWDKDRDGFVMGEGSGVLVMESLESATKRGAKIIAEYLGGAITCDAHHMTDPRADGLGVSSCISKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSELKMNATKSMIGHGLGAAGGLEAIATIKAITTGWLHPSINLDNLEASVTIDTVPNVKKKHEVNVGISNSFGFGGHNSVVVFAPFRP 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00235 491 Pfam Beta-ketoacyl synthase, C-terminal domain 334 446 IPR014031 -
Gma08g00235 491 PANTHER 3-OXOACYL-(ACYL CARRIER) SYNTHASE II 40 491 - -
Gma08g00235 491 CDD KAS_I_II 79 486 IPR000794 -
Gma08g00235 491 SUPERFAMILY Thiolase-like 293 487 IPR016039 GO:0016746
Gma08g00235 491 PANTHER POLYKETIDE SYNTHASE-RELATED 40 491 IPR000794 -
Gma08g00235 491 TIGRFAM fabF: beta-ketoacyl-acyl-carrier-protein synthase II 79 486 IPR017568 GO:0006633|GO:0016747
Gma08g00235 491 Gene3D - 48 490 IPR016039 GO:0016746
Gma08g00235 491 Pfam Beta-ketoacyl synthase, N-terminal domain 79 325 IPR014030 -
Gma08g00235 491 ProSitePatterns Beta-ketoacyl synthases active site. 233 249 IPR018201 GO:0004315|GO:0006633
Gma08g00235 491 SUPERFAMILY Thiolase-like 79 330 IPR016039 GO:0016746
Gma08g00235 491 SMART Beta-ketoacyl synthase 81 491 IPR020841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00235 Gma-Chr8 1993200 1997032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00235 33 491 Acyl Lipid Metabolism Gene Families AT5G46290 73.474 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00235 K09458 - gmx:100798044 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00235 08 1993200 1997032 Gma08g00235 08 1993200 1997032 ECH
Gma05g02128 05 42466076 42470042 Gma08g00235 08 1993200 1997032 GST