Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02128 ATGGCAAGCATTGCTGGTACATGTCCTTTAGGAGCATTGCTCAGAAACATCTCAGAAAACAATGGGAAGATATCTGTCGTTCATTATGAGGGGCTTAGATTGCAGCAGAGACTACAAATGCATTCGCCAAGTCACTACATTTCAGCTTCTTCATCTCCAAGATGCAGAACAATCAAGGTCATGGCTTCACCAACTGTTGCAGCACCAAAGAGAGAAAAGGATCCAAAAAAGCGAGTAGTAATAACAGGAATGGGTCTTGTGTCTGTCTTTGGTAGTGACATTGATGGCTTTTACAACAAGCTTCTTGAGGGAGAAAGTGGGATAAGCCTAATAGATAGGTTTGATGCCTCAAACTTCCCGGTCCGTTTTGGAGGTCAGATACGTGATTTCTCTTCAGAAGGCTACATTGATGGCAAGAATGACCGGCGCCTTGACGATTGCTGGAGGTATTGCATTGTTGCAGGCAAGAGGGCCCTTGATGATGCCAACCTTGGACAGCAAGTCCTGGACACTATGGACAAAACAAGAATAGGAGTTCTGGTGGGATCAGGAATGGGAGGTATAACGGCTTTCTCTACTGGTGTGGAAGCTCTTGTACAGAAGGGGTATAAGAAAATTACTCCATTTTTCATTCCCTACTCCATCACCAACATGGGTTCTGCCTTGTTGGCCATAGACACAGGCCTAATGGGTCCCAATTATTCCATTTCCACTGCTTGTGCAACGGCGAATTACTGCTTTTGTTCGGCTGCTAATCACATTAGAAAAGGTGAAGCAGATATCATGGTGGTTGGTGGAACTGAGGCTGCAATCATGCCTAGTGGTCTTGGAGGCTTCATTGCTTGCAGGGCTTTGTCTCACAGGAATGAAGGCCCCAAGAAGGCTTCAAGACCATGGGACAAAGATCGTGATGGTTTTGTGATGGGTGAAGGCTCTGGTGTGCTGGTAATGGAGAGCTTGGAGAGTGCAACAAAAAGGGGAGCCAGAATAATAGCAGAATATTTGGGGGGTGCCATAACATGTGATGCTCATCACATGACTGATCCAAGAGCTGATGGGCTTGGAGTTTCATCTTGCATAAGCAAGAGTTTAGAAGATGCTGGAGTTTCCCCTGAAGAGGTAAACTATGTGAATGCTCATGCCACATCAACACTGGCTGGTGACTTGGCTGAGGTTAATGCAATTAAAAAGGTTTTTAAGGACACGTCAGAATTGAAAATGAATGCAACTAAGTCAATGATTGGTCATGGTCTTGGGGCTGCTGGTGGTTTGGAAGCCATAGCAACAATCAAAGCCATAACAACTGGCTGGTTGCATCCAACCATTAACCAAGATAACTTGGAGGCTAGTGTTACCATTGACACTGTCCCTAACGTTAAGAAGAAGCACGAAGTGAATGTTGGTATATCCAACTCATTTGGATTCGGTGGACACAATTCAGTAGTTGTCTTTGCCCCATTCAGGCCATAA 1470 0.451 MASIAGTCPLGALLRNISENNGKISVVHYEGLRLQQRLQMHSPSHYISASSSPRCRTIKVMASPTVAAPKREKDPKKRVVITGMGLVSVFGSDIDGFYNKLLEGESGISLIDRFDASNFPVRFGGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGKRALDDANLGQQVLDTMDKTRIGVLVGSGMGGITAFSTGVEALVQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFCSAANHIRKGEADIMVVGGTEAAIMPSGLGGFIACRALSHRNEGPKKASRPWDKDRDGFVMGEGSGVLVMESLESATKRGARIIAEYLGGAITCDAHHMTDPRADGLGVSSCISKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSELKMNATKSMIGHGLGAAGGLEAIATIKAITTGWLHPTINQDNLEASVTIDTVPNVKKKHEVNVGISNSFGFGGHNSVVVFAPFRP 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02128 489 Pfam Beta-ketoacyl synthase, C-terminal domain 332 444 IPR014031 -
Gma05g02128 489 PANTHER 3-OXOACYL-(ACYL CARRIER) SYNTHASE II 38 489 - -
Gma05g02128 489 SUPERFAMILY Thiolase-like 77 328 IPR016039 GO:0016746
Gma05g02128 489 TIGRFAM fabF: beta-ketoacyl-acyl-carrier-protein synthase II 77 484 IPR017568 GO:0006633|GO:0016747
Gma05g02128 489 Gene3D - 47 488 IPR016039 GO:0016746
Gma05g02128 489 SMART Beta-ketoacyl synthase 79 489 IPR020841 -
Gma05g02128 489 CDD KAS_I_II 77 484 IPR000794 -
Gma05g02128 489 Pfam Beta-ketoacyl synthase, N-terminal domain 77 323 IPR014030 -
Gma05g02128 489 ProSitePatterns Beta-ketoacyl synthases active site. 231 247 IPR018201 GO:0004315|GO:0006633
Gma05g02128 489 SUPERFAMILY Thiolase-like 292 485 IPR016039 GO:0016746
Gma05g02128 489 PANTHER POLYKETIDE SYNTHASE-RELATED 38 489 IPR000794 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02128 Gma-Chr5 42466076 42470042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02128 37 489 Acyl Lipid Metabolism Gene Families AT5G46290 72.458 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02128 K09458 - gmx:100808453 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02128 05 42466076 42470042 Gma05g02128 05 42466076 42470042 ECH
Gma05g02128 05 42466076 42470042 Gma08g00235 08 1993200 1997032 GST