Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00212 ATGGAAAAGCTTATTCGCATGTTCCCTTTGCTCCTTGTTCTTCTTCTGTGCCCCAATTTTGCCTTTGCTGGCCATGACTACGGCCAAGCTCTTAGCAAGAGCCTTCTGTTCTTTGAAGCTCAGAGATCTGGTTACCTTCCCCACAACCAGAGGGTCACATGGAGAGCACATTCTGGTTTGCAAGATGGCAAAGCAAGCGGGGTGGATCTAGTTGGAGGGTACTATGATGCAGGGGACAATGTGAAGTTCGGGTTACCCATGGCGTTTACCGTTACGATGATGTCGTGGAGCATCATTGAATACGGCAAACAAATGGCTGCTAGTGGTGAACTTGGTCACGCCATGGAAGCCGTTAAGTGGGGTACGGACTACTTCATCAAAGCGCACCCTCAAGCCAATGTTCTCTATGGAGAGGTGGGAGATGGGAACACTGACCATTACTGTTGGCAAAGACCAGAGGACATGACAACCGACCGTCATGCCTACAAGGTCGATCCGAGCAATCCCGGTTCCGATCTCGCCGGAGAAACCGCCGCCGCAATGGCCGCCGCATCCATAGTTTTCAGACGCTCTAACCCTGCCTATGCCGGCGAACTTCTCCGCCATGCCTACCAGCTATTTGATTTTGCTGACAAATACAGAGGCAAATATGACAGCAGCATCACGGTTGCCCAAAAGTATTACAGATCCATCAGTGGTTACAATGATGAATTGCTCTGGGCTGCTGCTTGGTTGTATCAAGCATCTAACAACCAGTATTACTTGGATTACCTTGGAAGAAATGGTGATTCCATGGGTGGAACTGGTTGGAGCATGACTGAATTTGGTTGGGATGTCAAGTATGCTGGTGTTCAGACATTAGTTGCCAAGTTCCTGATGCAAGGCAAATCTGGGCATCATGCTCCAGTTTTCGAGAGATACCAGCAGAAGGCTGAAACTTTCATGTGTTCATGCCTTGGGAAGAGTAATCGCAATGTTCAGAAGACTCCTGGTGGCCTCATCTTCCGCCAGAGATGGAACAACATGCAGTTTGTCACAAGTGCCTCATTTTTAGCCACTGTCTACTCTGACTACCTTGCTTCATCTGGTAGAAACCTGAGATGCAGTTCAGGGAATGTCCCCCCTGCTGAGCTTCTCTCCCTTGCAAAGTCTCAGGTGGACTACCTTCTTGGGGACAACCCAAGAGCTACTAGTTACATGGTGGGCTATGGAAGCAACTTCCCACAAAGGGTTCATCACAGAGGTTCATCCATTGTTTCCATCAAGGTTAACCCTTCATTTGTCAGCTGCCGTGGAGGTTATGCTACATGGTTTAGCAGCAAAAGGAGCGACCCCAACCTGCTCACTGGTGCTCTTGTTGGTGGACCTGATGCATATGATGACTTTGCTGATGAAAGAGATAACTATGAGCAGACAGAGCCAGCAACATATAACAATGCTCCTCTTATTGGTATTCTGGCAAGACTAGGTGGAGGTCATGGTGGCTATAACCAGCTTCTTCCAGTTGTTGTTCCAGCTCCTAAGCCTGCTGTTACCAAGCCTCAACCAACCCCCAGTCCCAAGACAACTCCTTCTCCAGCTTCATGGTCAGGCCCAATTTCCATTGAACAGAAAAGGACCACCTCATGGGTTGCCAATGGAAAAACTTATTACAGATACTCAACAGTCGTGACTAACAAATCTAACAAGAGTCTCAATTCTCTCAATCTTTCAATATCCAAGCTTTATGGTCCAATCTGGGGTGTCACAAAGTCAGGTGATTCATACACATTCCCATCATGGCTCAGCTCATTATCAGCTGGCAAAAGCCTTGAATTTGTCTACATCCATTCTGCTTCTCCAGCAGATGTCTCCGTGGCGAACTACGTGTTGGCCTGA 1878 0.4808 MEKLIRMFPLLLVLLLCPNFAFAGHDYGQALSKSLLFFEAQRSGYLPHNQRVTWRAHSGLQDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMEAVKWGTDYFIKAHPQANVLYGEVGDGNTDHYCWQRPEDMTTDRHAYKVDPSNPGSDLAGETAAAMAAASIVFRRSNPAYAGELLRHAYQLFDFADKYRGKYDSSITVAQKYYRSISGYNDELLWAAAWLYQASNNQYYLDYLGRNGDSMGGTGWSMTEFGWDVKYAGVQTLVAKFLMQGKSGHHAPVFERYQQKAETFMCSCLGKSNRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASSGRNLRCSSGNVPPAELLSLAKSQVDYLLGDNPRATSYMVGYGSNFPQRVHHRGSSIVSIKVNPSFVSCRGGYATWFSSKRSDPNLLTGALVGGPDAYDDFADERDNYEQTEPATYNNAPLIGILARLGGGHGGYNQLLPVVVPAPKPAVTKPQPTPSPKTTPSPASWSGPISIEQKRTTSWVANGKTYYRYSTVVTNKSNKSLNSLNLSISKLYGPIWGVTKSGDSYTFPSWLSSLSAGKSLEFVYIHSASPADVSVANYVLA 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00212 625 PANTHER ENDOGLUCANASE 10 591 - -
Gma08g00212 625 MobiDBLite consensus disorder prediction 510 531 - -
Gma08g00212 625 PANTHER ENDO-1,4-BETA-GLUCANASE 10 591 - -
Gma08g00212 625 MobiDBLite consensus disorder prediction 510 525 - -
Gma08g00212 625 Pfam Carbohydrate binding domain CBM49 533 610 IPR019028 GO:0030246
Gma08g00212 625 SMART CBM49_2 533 613 IPR019028 GO:0030246
Gma08g00212 625 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 462 480 IPR033126 -
Gma08g00212 625 SUPERFAMILY Six-hairpin glycosidases 24 500 IPR008928 GO:0005975
Gma08g00212 625 Pfam Glycosyl hydrolase family 9 27 486 IPR001701 GO:0004553|GO:0005975
Gma08g00212 625 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 388 414 IPR018221 -
Gma08g00212 625 Gene3D - 24 491 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00212 Gma-Chr8 1836374 1841116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00212 17 625 Glycoside Hydrolase AT1G64390 79.475 0.0 1021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00212 K01179 - gmx:100801949 1213.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00212 08 1836374 1841116 Gma08g00212 08 1836374 1841116 ECH
Gma05g02108 05 42311543 42316922 Gma08g00212 08 1836374 1841116 GST