Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02108 ATGGAAAAGCTTATTCGCATGTTCCCTTTGCTTCTTCTTCTTCTTCTGTTCCCCACTTTTGCCTTCGCTGGCCATGACTATGGCCAAGCTCTGAGCAAGAGCCTTCTCTTCTTTGAAGCCCAGAGATCTGGCTACCTTCCCCACAACCAGAGAGTCACATGGAGAGCACATTCTGGTTTGCAAGATGGCAAAGCAAGCGGGGTGGATCTAGTTGGAGGGTACTATGATGCAGGGGACAATGTGAAGTTCGGGTTACCCATGGCGTTTACCGTTACGATGATGTCGTGGAGCATCATTGAATACGGCAAACAAATGGCTGCTAGTGGTGAACTTGGTCACGCCATGGAAGCCGTTAAGTGGGGTACGGACTACTTCATCAAAGCTCACCCTCAACCCAATGTTCTCTACGGAGAGGTGGGAGACGGGAACACTGACCATTACTGTTGGCAAAGGCCAGAGGACATGACAACCGACCGTCATGCCTACAAGATCGATCCAAGCAATCCCGGGTCGGATCTTGCCGGAGAAACCGCCGCCGCTATGGCCGCTGCCTCCATTGTTTTCCGACGCTCTAACCCTGCCTATGCCGCCGAACTCCTCCGCCATGCCTACCAGCTATTTGATTTTGCTGACAAATACAGAGGCAAATATGACAGCAGCATTACGGTTGCCCAGAAATATTACAGATCCATCAGTGGTTACAATGATGAATTGCTCTGGGCTGCTGCTTGGCTCTACCAAGCATCTAACAATCAGTATTACTTGGATTACCTTGGAAGAAATGGTGATTCCATGGGTGGAACTGGTTGGAAGATGACTGAATTTGGTTGGGATGTCAAGTATGCTGGTGTTCAGACATTAGTTGCCAAGTTCCTGATGCAAGGCAAAGCTGGGCATCATGCTCCAGTTTTCGAGAGATATCAGCAGAAGGCTGAATCTTTCATGTGTTCGTGCCTTGGAAAGGGTGATCGCAATGTTCAGAAGACTCCGGGTGGCCTCATCTTCCGCCAGAGATGGAACAACATGCAGTTTGTCACAAGTGCCTCATTTTTAGCCACTGTCTACTCTGACTACCTTGCTTCCTCTGGTAGAAACTTGAGGTGCAGTTCAGGCAATGTGCCCCCTGCTGAACTTATCTCCCTTGCAAAGTCTCAGGTTGACTATCTTCTTGGTGACAACCCAAGAGCCACTAGCTATATGGTGGGCTATGGAAGCAACTTCCCACAAAGGGTTCATCACAGAGGTTCATCCATTGTTTCCATCAAGGTTAACCCTTCATTTGTCAGCTGCCGTGGAGGTTATGCTACTTGGTTTAGCAGCAAAAGGAGCGACCCGAACCTGCTCACTGGTGCTCTTGTTGGTGGACCTGATGCATATGATGACTTTGCTGATGAAAGAGATAACTATGAGCAGACAGAGCCAGCAACCTATAACAATGCTCCTCTTATCGGTATTCTGGCAAGACTAGGTGGAGGTCATGGTGGCTATAACCAGCTTCTTCCAGGTATTGCCATCATTATTCTCGCTTTATGCCCCTCTCCTGTTAAAATTCTTGTACTGATGATAATATAG 1572 0.4841 MEKLIRMFPLLLLLLLFPTFAFAGHDYGQALSKSLLFFEAQRSGYLPHNQRVTWRAHSGLQDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMEAVKWGTDYFIKAHPQPNVLYGEVGDGNTDHYCWQRPEDMTTDRHAYKIDPSNPGSDLAGETAAAMAAASIVFRRSNPAYAAELLRHAYQLFDFADKYRGKYDSSITVAQKYYRSISGYNDELLWAAAWLYQASNNQYYLDYLGRNGDSMGGTGWKMTEFGWDVKYAGVQTLVAKFLMQGKAGHHAPVFERYQQKAESFMCSCLGKGDRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASSGRNLRCSSGNVPPAELISLAKSQVDYLLGDNPRATSYMVGYGSNFPQRVHHRGSSIVSIKVNPSFVSCRGGYATWFSSKRSDPNLLTGALVGGPDAYDDFADERDNYEQTEPATYNNAPLIGILARLGGGHGGYNQLLPGIAIIILALCPSPVKILVLMII 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02108 523 Gene3D - 24 491 IPR012341 GO:0005975
Gma05g02108 523 PANTHER ENDOGLUCANASE 5 504 - -
Gma05g02108 523 SUPERFAMILY Six-hairpin glycosidases 24 495 IPR008928 GO:0005975
Gma05g02108 523 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 462 480 IPR033126 -
Gma05g02108 523 Pfam Glycosyl hydrolase family 9 27 486 IPR001701 GO:0004553|GO:0005975
Gma05g02108 523 PANTHER ENDO-1,4-BETA-GLUCANASE 5 504 - -
Gma05g02108 523 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 388 414 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02108 Gma-Chr5 42311543 42316922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02108 1 516 Glycoside Hydrolase AT1G64390 82.171 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02108 K01179 - gmx:732598 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02108 05 42311543 42316922 Gma05g02108 05 42311543 42316922 ECH
Gma05g02108 05 42311543 42316922 Gma08g00212 08 1836374 1841116 GST