Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00180 ATGGCTCAGAGCCCTGATCAGCAGATGAAGCCCTTAGCTCCATTCGTATCATCAACAAGCCACTTCAGCAGACAAGAAGATCATGATCAGTTTCAAGACACATCCGAACAGAAAATCATTCGCATAAGAAAGTTCGTGTTGTGCTGCGGTTGCTTCACTGCCCTTGTCGTGATACTTGTGGTCGTACTCATAGTCTTGGGCTTCACCGTTTACAATGTCAAAGAACCCGAGGTGAGTATGAATTCGGTTACTCTTGTAAGTGGAACTTTTGCAAACAGTGGTGCCACAAACAACGTTACACTTCTTGCTGATATCTCTGTAAAGAACACAAACGCTTTTACCCTCAGGTTTGGAAAAACTACCACCATTGTTTACTATGGTGGTATGGGAATAGGTGAGGGTACTTCTCCACCGGGTAAGGCCAAGGCAAGAAGGACCATAAGGGTAAACTCGACCTTGGAGATTATGGCAAAGAAGCTTTTAGATATCCCAACTTTGAATATTGACCTCAGGGATCAATCTTTGAATATCAGCAGCTATACCAGGATAGATGGTAAGGTGAAAATACTCAACATGTTTCCGAGGAAGGTTGTGGTTGAGCTTAATTGCACCATTGGATACAACATCACCACTGGGTTGGTCACAAATGGTGACAATTGTCTTGGAACCGTTGATATTTAG 681 0.4332 MAQSPDQQMKPLAPFVSSTSHFSRQEDHDQFQDTSEQKIIRIRKFVLCCGCFTALVVILVVVLIVLGFTVYNVKEPEVSMNSVTLVSGTFANSGATNNVTLLADISVKNTNAFTLRFGKTTTIVYYGGMGIGEGTSPPGKAKARRTIRVNSTLEIMAKKLLDIPTLNIDLRDQSLNISSYTRIDGKVKILNMFPRKVVVELNCTIGYNITTGLVTNGDNCLGTVDI 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00180 226 Gene3D - 61 205 - -
Gma08g00180 226 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 24 225 - -
Gma08g00180 226 SUPERFAMILY LEA14-like 57 163 - -
Gma08g00180 226 Pfam Late embryogenesis abundant protein 105 204 IPR004864 -
Gma08g00180 226 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 24 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00180 Gma-Chr8 1582393 1583460 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00180 - - gmx:100527705 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00180 08 1582393 1583460 Gma08g00180 08 1582393 1583460 ECH
Gma05g02077 05 42046460 42047134 Gma08g00180 08 1582393 1583460 GST