Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02077 ATGGCTCAGAGCCCTGATCAGCAGATGAAGCCCTTAGCTCCATTCATATCATCAACCCAGTTCAGCAGACAAGAAGATCAGTTTCAAGAGAGAACATCCGAACAGAAAATCATTCGCATAAGAAAGTTCGTGCTGTGCTGCGGTTGTTTCACTGCCCTTGTTGTGATACTCGTGGTCATACTGATAGTCTTGAGCTTCACCGTTTACAATGTCAAAGAACCCGAGAACACAAACGCTTTTACCCTGAGGTTTGGAAGCACCAGCACCATTGTTTACTATGATGGTGTGAGAATAGGTGAGGGTACTTCTCCACCGGGTAAGGCCAAGGCAAGAAGGACCATAAGGGTAAACTCGACCTTGGAGATTATGTCAAAGAAGCTTTTGGAAATCCCAACTTTGAATATTGACCTCAGGGATCAGTTTTTGAATATCAGCAGCTATACAAGGATAGATGGTAAGGTGAAAATACTCAACATATTTCCGAGGAAGGTTGTGGTTGAGATGAATTGTACCATTGGATACAACATCACCACTGGGTCGGTCACAAATGGTGATAATTGTCTTGGAGCCGTTGATATTTAG 582 0.4347 MAQSPDQQMKPLAPFISSTQFSRQEDQFQERTSEQKIIRIRKFVLCCGCFTALVVILVVILIVLSFTVYNVKEPENTNAFTLRFGSTSTIVYYDGVRIGEGTSPPGKAKARRTIRVNSTLEIMSKKLLEIPTLNIDLRDQFLNISSYTRIDGKVKILNIFPRKVVVEMNCTIGYNITTGSVTNGDNCLGAVDI 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02077 193 Pfam Late embryogenesis abundant protein 75 171 IPR004864 -
Gma05g02077 193 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 75 192 - -
Gma05g02077 193 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 26 75 - -
Gma05g02077 193 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 26 75 - -
Gma05g02077 193 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 75 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02077 Gma-Chr5 42046460 42047134 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02077 - - gmx:100781009 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02077 05 42046460 42047134 Gma05g02077 05 42046460 42047134 ECH
Gma05g02077 05 42046460 42047134 Gma08g00180 08 1582393 1583460 GST