Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00179 ATGAATGGTATTCCGAGACACGAGCGCCGATGGGCGTCCGACAGCGTTCCGGGAAAAGCGACCGTCAGCGCCGGAACTTCGCCGGGAACTGAGTCCAACTCCGCCGCGGAGGAGTTCGTGGAGGTGACACTCGATCTTCAAGACGATGACACCATCGTTCTCCGGAGCGTCGAGCCAGCCTCCGTCATTAGCATCGACGACAGCGTCGCCGGCAGCGGAAATCAAACTCCGGCGTCGGTTTCGAGGTCTCCGACTATACGTCGGAGCTCGTCGAGAGGATTCCGGCAGTTCTCGCAGGAGCTGAAAGCCGAGGCGGTTGCGAAGGCCAGGCAGTTCTCGCAGGAGCTGCGGCGCTTCTCGTGGAGCCATGGCCATGCTTCGCGCGCGCTTTCGTCTTCCTCTGCTCCGAACGGCGCCGGCGCCGGATTTGAAACGGCGTTGGCGGCTCGCGCTCTCAGGAAACAACGAGCTCAGCTTGATCGCACGCGCTCCGGTGCGCACAAAGCGCTTCGCGGTCTGAAATTTATCAGCAACAGGTCCAATGGCGTTGATGCGTGGAACGAGGTGCAGAGCAACTTCGATAGGCTTGCTAAGGACGGTTTTCTCAATCGCACCGATTTCGCTCAATGCATAGGTATGAAGGATTCGAAGGAATTCGCTCTGGAACTGTTTGATGCTCTGAGTCGTAAACGAAGGTTGAGAACTGACAAAATCAGCAGGGAAGAACTGTTCGAATTCTGGTCGCAAATTACCGATCAAAGTTTTGATTCGCGGCTCCAGATCTTCTTCGACATGGTGGACAAGAACGAAGATGGGAGAATCACCGAAGAAGAGGTGAAAGAGATCATCCTGTTAAGCGCTTCTGCAAATAGGTTGTCCAGATTGCAGGAACAGGCTGAAGAATATGCAGCTCTAATCATGGAAGAGTTGGACCCCGAAGGACTTGGCTACATCGAGCTATGGCAATTGGAGACGCTTCTTTTACAAAAGGACACGTACCTTAACTACAGCCAAGCTCTTAGCTACACAAGCCAAGCTTTGAGCCAGAACCTACAGGGGCTGAGGAAGAAAAGTCCTATACGTAGAATGAGCCGCAGATTGGTCTACTATTTGCAAGAGAATTGGAGGAGACTTTGGGTTTTAACACTGTGGGTTTCCATAATGATTGGGCTGTTCACGTGGAAGTTTATTCAGTACAAGAACAAAGATGCATTTCAGATCATGGGTTACTGTCTTCTCACGGCTAAAGGTGCGGCTGAGACTCTAAAGTTCAACATGGCACTTATACTCTTGCCCGTGTGCAGAAACACCATAACTTGGCTCAGGTCGACCAAGCTGGGCTATGTTGTACCTTTTGATGACAACATCAACTTTCATAAGACAATTGCCGGGGCCATCGTGATTGGTATTATACTTCATGCCGGGGATCACCTTGCTTGTGATTTTCCAAGACTTGTAAGTACGTCTGAAGAACGTTATGAAAAGTATTTGAAAGGCGTATTTGGTGATCATAAACCCAGTTATGTAGACCTAGTTAAAGGCGTCGAGGGTGTGACTGGAATTTTGATGGTGTTTCTTATGATAATAGCATTTACACTTGCTACCAAATGGTTCCGGAGAAATCTCATTAAGCTGCCTAAACCGTTTAGCAGGCTCACTGGCTTCAATGCCTTCTGGTATTCACACCATTTGTTTGTCATTGTCTATGTCCTCCTCATCATCCACGGAATAAAGCTTTACCTCGTGCATAAATGGTACCACAAAACGACATGGATGTATCTTGCGGTTCCTGTTTTACTTTATGCGTCAGAGAGAATACTCAGATTATTTCGTTCTGGTTTGTATACAGTCCGTCTTGGAAAGGTTGCCATATATCCTGGAAATGTTCTCACATTGCAAATGTCTAAGCCTCCTCAATTTCGCTACAAGAGCGGACAATACATGTTTGTGCAGTGTCCTGCTGTTTCTCCGTTCGAGTGGCATCCTTTCTCTATTACCTCAGCCCCTGGCGATGACTACCTGAGTGTTCACATTCGGCAACTGGGTGATTGGACACAGGAACTTAAAAGAGTGTTCTCTGAGGCCTGTGAGCCACCTGTGTCAGGGAAGAGTGGGCTTCTCAGGGCTGATGAAACAACTAAGAAAAGTTTGCCGAAGTTAAAGATAGATGGACCTTACGGTGCGCCAGCGCAAGATTATAAAAAATATGATGTTTTGTTACTTGTCGGTCTCGGGATAGGAGCAACACCTTTCATCAGCATTCTAAAAGATCTTCTCAAAAACATCATCAAAATGGAGGAAATGGCGGATTCAATCTCTGATATAAGTAGAGGTTCAGACCTTAGTGTTGGGAGTACTACTGATTCACCATCTCTTAATAAAAATGCGCCAAAACGGAAGAAAACACTGAAGACTACCAACGCTTATTTTTACTGGGTTACAAGAGAGCAAGGCTCTTTTGATTGGTTCAAAGGAGTCATGAATGAAGTAGCAGAGCTTGATCAAAGGGGTGTCATTGAGATGCACAACTACTTGACTAGTGTATACGAGGAAGGGGATGCCAGATCCGCTCTCATCACCATGGTGCAAGCACTCAACCATGCCAAAAATGGAGTTGACATTGTTTCTGGCACTAGAGTGCGAACTCATTTTGCTAGGCCTAACTGGAAGAAGGTTTTCTCTAAAATGTGCTCCAAGCACTGTAATGGACGAATAGGGGTATTTTATTGTGGTGCACCGGTTTTGGCCAGAGAACTTAGCAAGCTCTGCTTCGAGTTCAATGAAAAGGGTCCAACTAAATTTGAGTTCCACAAGGAGCATTTCTAA 2826 0.4735 MNGIPRHERRWASDSVPGKATVSAGTSPGTESNSAAEEFVEVTLDLQDDDTIVLRSVEPASVISIDDSVAGSGNQTPASVSRSPTIRRSSSRGFRQFSQELKAEAVAKARQFSQELRRFSWSHGHASRALSSSSAPNGAGAGFETALAARALRKQRAQLDRTRSGAHKALRGLKFISNRSNGVDAWNEVQSNFDRLAKDGFLNRTDFAQCIGMKDSKEFALELFDALSRKRRLRTDKISREELFEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIILLSASANRLSRLQEQAEEYAALIMEELDPEGLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRKKSPIRRMSRRLVYYLQENWRRLWVLTLWVSIMIGLFTWKFIQYKNKDAFQIMGYCLLTAKGAAETLKFNMALILLPVCRNTITWLRSTKLGYVVPFDDNINFHKTIAGAIVIGIILHAGDHLACDFPRLVSTSEERYEKYLKGVFGDHKPSYVDLVKGVEGVTGILMVFLMIIAFTLATKWFRRNLIKLPKPFSRLTGFNAFWYSHHLFVIVYVLLIIHGIKLYLVHKWYHKTTWMYLAVPVLLYASERILRLFRSGLYTVRLGKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDYLSVHIRQLGDWTQELKRVFSEACEPPVSGKSGLLRADETTKKSLPKLKIDGPYGAPAQDYKKYDVLLLVGLGIGATPFISILKDLLKNIIKMEEMADSISDISRGSDLSVGSTTDSPSLNKNAPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKMCSKHCNGRIGVFYCGAPVLARELSKLCFEFNEKGPTKFEFHKEHF 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00179 941 MobiDBLite consensus disorder prediction 778 799 - -
Gma08g00179 941 PANTHER NADPH OXIDASE 27 941 - -
Gma08g00179 941 MobiDBLite consensus disorder prediction 1 36 - -
Gma08g00179 941 CDD NOX_Duox_like_FAD_NADP 621 883 - -
Gma08g00179 941 Gene3D - 727 941 IPR039261 -
Gma08g00179 941 MobiDBLite consensus disorder prediction 19 36 - -
Gma08g00179 941 PRINTS Cytochrome B-245 heavy chain signature 518 541 IPR000778 GO:0016020|GO:0016491
Gma08g00179 941 PRINTS Cytochrome B-245 heavy chain signature 718 731 IPR000778 GO:0016020|GO:0016491
Gma08g00179 941 PRINTS Cytochrome B-245 heavy chain signature 741 758 IPR000778 GO:0016020|GO:0016491
Gma08g00179 941 MobiDBLite consensus disorder prediction 67 94 - -
Gma08g00179 941 SFLD NADPH oxidase subgroup (NOX) 104 941 - -
Gma08g00179 941 MobiDBLite consensus disorder prediction 778 793 - -
Gma08g00179 941 ProSitePatterns EF-hand calcium-binding domain. 267 279 IPR018247 -
Gma08g00179 941 CDD EFh 218 283 IPR002048 GO:0005509
Gma08g00179 941 Pfam Ferric reductase like transmembrane component 417 573 IPR013130 -
Gma08g00179 941 Pfam Respiratory burst NADPH oxidase 158 257 IPR013623 GO:0004601|GO:0050664
Gma08g00179 941 Gene3D - 159 275 - -
Gma08g00179 941 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 733 941 IPR039261 -
Gma08g00179 941 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 612 732 IPR017927 GO:0016491
Gma08g00179 941 Pfam Ferric reductase NAD binding domain 736 923 IPR013121 GO:0016491
Gma08g00179 941 Gene3D Translation factors 604 695 - -
Gma08g00179 941 Coils Coil 285 305 - -
Gma08g00179 941 SUPERFAMILY Riboflavin synthase domain-like 615 728 IPR017938 -
Gma08g00179 941 ProSiteProfiles EF-hand calcium-binding domain profile. 254 289 IPR002048 GO:0005509
Gma08g00179 941 SUPERFAMILY EF-hand 186 336 IPR011992 -
Gma08g00179 941 Pfam FAD-binding domain 616 729 IPR013112 GO:0016491
Gma08g00179 941 PANTHER RESPIRATORY BURST OXIDASE2 27 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00179 Gma-Chr8 1570901 1579472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00179 9 941 Miscellaneous Gene Families AT1G64060 78.662 0.0 1538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00179 K13447 - gmx:100801077 1858.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00179 08 1570901 1579472 Gma08g00179 08 1570901 1579472 ECH
Gma05g02076 05 42032834 42041650 Gma08g00179 08 1570901 1579472 GST
Gma01g02227 01 57486988 57496096 Gma08g00179 08 1570901 1579472 PCT
Gma11g00188 11 1464601 1475055 Gma08g00179 08 1570901 1579472 PCT