Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02227 ATGAACGGTGCTCCCAAGCACGAACGCCGCTGGGCGTCCGACACCGTGCCGGAGATGGCATTCGTCAGCGCCGGGACTTCGCCGGGAACTGAGTACAACTCCGTCACCGACGAGTACGTTGAGGTCACTCTCGATGTTCACGACGATCACACCATCGTTCTCCGCGACGTTGAGCCGGTGACTGTCGTTAACATCGACGACGGCGTCGCAACAAGTGGAAACGAAACTCCGACGTCCTCCGCGTGGTCGCCGTCGATCAGGAGGAGCTCTCCTAACCGGTGGCGGCAGTTCTCGCAGGAGCTGAAGGCCGAGGCGGTTGCGAAGGCGAGGCAGTTTTCGCAGGAGCTCAAGGCGGAGCTGCGGTGGTTCTCGTGGAGCCAAGGCGGATCTGAAACGGCGTTGGTGGCTCGAGATCTCAGGAAGCAGCGCGCTCAGCTTGACCGCAACCGCTCCGGTACGAAGAAAGCGCTCCGTGGACTGAAATTTATTAGCAGTAAATCCAATGGCGCTGACGCCTGGAACGAGGTGCAAAGCAATTTCTATAGTCTTGCCAAGGACGGTTATCTTTATCGCACTGATTTTGCGCAATGCATAGGGATGAAGGACTCTAAGGAGTTCGCTCTGGAACTATTTGACGCGCTGAGTCGTAGACGTAGACTGAAGGTTGAAAAGATCAGCAGAGACGAGCTTAACGAATTCTGGTCGCAAATTACCGATCAAAGCTTTGATTCGCGGCTTCAGATATTCTTTGACATGGTGGACAAGAATGAAGATGGTAGGATCACCGAAGAAGAAGTGAAAGAGATCATTATGCTAAGCGCTTCAGCAAATAAATTATCCAGATTGAAAGAGCAGGCCGAGGAATACGCAGCTCTGATCATGGAAGAGTTAGACCCTGAAAGACTTGGCTACATCGAGCTATGGCAACTGGAGACGCTTCTGTTACAAAAGGACACGTATCTCAACTACAGCCAAGCACTAAGCTACACCAGTCAAGCTTTGAGCCAGAACCTACAAGGACTAAGGGCGAGAAGTCCGATACGTAGGATGAGCCGCAGAATGCTGTACTATTTGCAAGAAAATTGGAGGAGACTTTGGATTTTAGCATTGTGGATTTCTGCTATGATTGGGCTGTTTACGTGGAAGTTCATCGAGTACAAGAGGAAAAATGCTTATCATATCATGGGTTACTGTCTTCTCGCGGCCAAAGGTGCTGCTGAGACTCTGAAGTTCAACATGGCACTTATACTCTTGCCCGTCTGCAGAAATACCATAACTTGGCTCAGGTCCACCAAGTTGGCTTACATTGCACCTTTCGATGATAACATCAACTTTCATAAGACAATTGCTGCGGCAGTAGTGATTGGTGTTATACTTCATGCCGGGAATCACCTTGCTTGTGATTTTCCTAGACTTGTAAATTCGTCTGAAAAAGATTATGAGACGTATTTGGATGGCGTATTTGGTGATCATAAACCCAGTTACGGAGACCTCATTAAAGGGGTTGAGGGTGTGACAGGAATTCTGATGGTGATTTTGATGGCAATAGCATTTACTCTTGCAACAAAATGGTTCAGGAGAAATCTCGTTAAGCTTCCTAAACCGTTTAATAGGCTCACTGGTTTCAATGCGTTCTGGTATTCTCACCATCTATTTGTGATTGTTTATGTCCTGCTCACTATTCATGGTGTATATCTTTACCTCGAGCGCAGATGGCACCTTCAAACGACATGGATGTATCTTGCCGTTCCAATTTTACTTTATGCCGGGGAAAGAACGCTAAGATTCTTCCGTTCTGGTTTCTATACAGTCCGTCTAATAAAGGTTGCCATTTATCCTGGAAATGTTCTGACATTGCAAATGTCAAAGCCGTCTCAATTTCGATACAAGAGCGGACAATACATGTTTGTGCAATGTCCTGCTGTTTCTCCATTTGAGTGGCATCCGTTTTCAATTACCTCTGCCCCTGATGATGACTACCTGAGTGTTCACATACGGCAACTGGGAGATTGGACACAGGAGCTCAAAAGGGTATTCTCTGCGGCCTGTGAGCCTCCCTTAGCTGGGAAGAGCGGGCTTCTCAGGGCTGATGAAACCACCAAGAAATGCTTACCAAAGTTAAGGATAGATGGACCTTACGGTGCGCCAGCACAAGACTACAGAAACTATGATGTCCTGCTACTTGTCGGTCTCGGGATAGGAGCAACACCTTTTATCAGCATTCTGAAAGATCTTCTCAACAATATCATCAAAATGGAGGAGCTGGCGGATTCAGTCTCTGATTCAAGTAGAGGTTCAGACCTTAGCACTGGGAGCGCAGATTCACTATCTTCTAATAAGATTTCTCCTAAACGGAAGAAGACACTGAAGACTACCAACGCATATTTCTACTGGGTAACAAGAGAACAAGGTTCTTTCGATTGGTTTAAAGGGGTCATGAATGAAGTTGCTGAACTTGATCAAAGGGGCGTTATTGAGATGCACAACTACTTAACTAGCGTATATGAGGAAGGAGATGCCAGATCCGCCCTCATTACAATGGTGCAAGCCCTCAACCACGCAAAAAATGGAGTTGATATTGTTTCCGGGACTAGGCTGAGAACTCATTTTGCTAAGCCTAACTGGAAGAAAGTTTTCTCTAGAATATGCTCTAAGCACTGCAATGGACGAATAGGGGTTTTCTATTGTGGCGCACCGGTTTTGGCAAAAGAATTAAGCAAGCTCTGCTTCGAGTTCAACGAAAAAGGTCAAACAAAATTTGAGTTCCACAAGGAGCATTTCTAA 2784 0.4684 MNGAPKHERRWASDTVPEMAFVSAGTSPGTEYNSVTDEYVEVTLDVHDDHTIVLRDVEPVTVVNIDDGVATSGNETPTSSAWSPSIRRSSPNRWRQFSQELKAEAVAKARQFSQELKAELRWFSWSQGGSETALVARDLRKQRAQLDRNRSGTKKALRGLKFISSKSNGADAWNEVQSNFYSLAKDGYLYRTDFAQCIGMKDSKEFALELFDALSRRRRLKVEKISRDELNEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRARSPIRRMSRRMLYYLQENWRRLWILALWISAMIGLFTWKFIEYKRKNAYHIMGYCLLAAKGAAETLKFNMALILLPVCRNTITWLRSTKLAYIAPFDDNINFHKTIAAAVVIGVILHAGNHLACDFPRLVNSSEKDYETYLDGVFGDHKPSYGDLIKGVEGVTGILMVILMAIAFTLATKWFRRNLVKLPKPFNRLTGFNAFWYSHHLFVIVYVLLTIHGVYLYLERRWHLQTTWMYLAVPILLYAGERTLRFFRSGFYTVRLIKVAIYPGNVLTLQMSKPSQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPDDDYLSVHIRQLGDWTQELKRVFSAACEPPLAGKSGLLRADETTKKCLPKLRIDGPYGAPAQDYRNYDVLLLVGLGIGATPFISILKDLLNNIIKMEELADSVSDSSRGSDLSTGSADSLSSNKISPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRLRTHFAKPNWKKVFSRICSKHCNGRIGVFYCGAPVLAKELSKLCFEFNEKGQTKFEFHKEHF 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02227 927 PANTHER RESPIRATORY BURST OXIDASE2 28 927 - -
Gma01g02227 927 SUPERFAMILY EF-hand 173 323 IPR011992 -
Gma01g02227 927 MobiDBLite consensus disorder prediction 68 89 - -
Gma01g02227 927 CDD EFh 224 271 IPR002048 GO:0005509
Gma01g02227 927 CDD NOX_Duox_like_FAD_NADP 606 927 - -
Gma01g02227 927 Gene3D Translation factors 591 682 - -
Gma01g02227 927 Pfam FAD-binding domain 602 716 IPR013112 GO:0016491
Gma01g02227 927 MobiDBLite consensus disorder prediction 760 779 - -
Gma01g02227 927 Pfam Ferric reductase like transmembrane component 404 559 IPR013130 -
Gma01g02227 927 ProSiteProfiles EF-hand calcium-binding domain profile. 241 276 IPR002048 GO:0005509
Gma01g02227 927 Pfam Ferric reductase NAD binding domain 723 909 IPR013121 GO:0016491
Gma01g02227 927 PRINTS Cytochrome B-245 heavy chain signature 505 528 IPR000778 GO:0016020|GO:0016491
Gma01g02227 927 PRINTS Cytochrome B-245 heavy chain signature 705 718 IPR000778 GO:0016020|GO:0016491
Gma01g02227 927 PRINTS Cytochrome B-245 heavy chain signature 728 745 IPR000778 GO:0016020|GO:0016491
Gma01g02227 927 Coils Coil 272 292 - -
Gma01g02227 927 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 599 719 IPR017927 GO:0016491
Gma01g02227 927 SUPERFAMILY Riboflavin synthase domain-like 602 716 IPR017938 -
Gma01g02227 927 MobiDBLite consensus disorder prediction 760 782 - -
Gma01g02227 927 SFLD NADPH oxidase subgroup (NOX) 102 927 - -
Gma01g02227 927 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 720 927 IPR039261 -
Gma01g02227 927 Pfam Respiratory burst NADPH oxidase 145 244 IPR013623 GO:0004601|GO:0050664
Gma01g02227 927 PANTHER NADPH OXIDASE 28 927 - -
Gma01g02227 927 Gene3D - 714 927 IPR039261 -
Gma01g02227 927 ProSitePatterns EF-hand calcium-binding domain. 254 266 IPR018247 -
Gma01g02227 927 Gene3D - 146 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02227 Gma-Chr1 57486988 57496096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02227 9 927 Miscellaneous Gene Families AT1G64060 75.873 0.0 1496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02227 K13447 - gmx:100805517 1850.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02227 01 57486988 57496096 Gma01g02227 01 57486988 57496096 ECH
Gma01g02227 01 57486988 57496096 Gma11g00188 11 1464601 1475055 GST
Gma01g02227 01 57486988 57496096 Gma05g02076 05 42032834 42041650 PCT
Gma01g02227 01 57486988 57496096 Gma08g00179 08 1570901 1579472 PCT