Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00170 ATGCCTTCCCCTTCAGTTCGCAGACTCACAATGGCCGCAATATCCAACTCCTTATCACTGAAGCACAGTTTCTCTCTGAGTCGAGCTCCTCCTTCTTCCTCTTCCATCAAATTCAAATTCAGAAGATGTTACGCCGCGTTCGCCAATGAGAATCGCGAGTACGTGATCGTTGGCGGCGGAAATGCCGCGGGATATGCTGCGCGCACTTTCGTTGAGCATGGAATGGCTGATGGTCGTCTCTGTATTGTAACCAAAGAGCCGTATGCACCTTACGAGCGTCCCGCTCTGACGAAAGCGTATTTGTTCCCGCCGGATAAGAAACCAGCACGCCTTCCTGGTTTTCACACTTGTGTTGGATCCGGTGGAGAGAGGCAGACTCCGGGGTGGTATAAAGAGAATGGGATAGAGATGTTGTATGAAGATCCAGTAAAAGATATTGATATTGAAAAGCATACTTTGACAACAAGTTCTGGAAAACTTCTGAAGTATGGTTCGCTTGTTATTGCTACAGGATGTACGGCATCAAGGTTTCCAGAGAAAATTGGGGGAAACCTACCTGGTGTTCACTATATTCGGGATGTTGGAGATGCCGATGCACTAATTTTATCGTTGGAGAAAGCAAAAAAGGTTGTAGTTGTTGGAGGTGGTTATATAGGAATGGAGGTTGCTGCTGCTGCTGTTGGTTGGAAACTTGATACAACAATCATATTCCCAGAAGATCACCTTTTGCAAAGACTGTTTACTCCTTCTCTTGCCCGGAGATATGAAGAACTCTATCAAAAGAATGGAGTCAAAATCTTGAAGGGTGCTTCCATAAAAAATTTGGAAGCTGGTTCTAATGGACATGTAGCTGCTGTGAAACTTGGAGATGGATCTCTTGTGGAGGCAGATACGGTAATTATAGGCATTGGAGCAAAACCTGCTGTGACTCCCTTTGAGAGGGTGGGCCTGAATACAGAGGTTGGTGGTATACAGGTTGATGGTCAGTTTCGGACAAGCACTCCCGGAATCTTTGCTGTTGGTGATGTAGCAGCTTTCCCTTTGAAGATTTATAATCGTATCTCTCGAGTGGAGCATGTGGATCATGCCCGTCGCTCTGCACAGCACTGTGTGAAAGCATTACTCAGTGCACAAACTCACACGTATGATTATCTTCCATACTTCTACTCGAGGATTTTTGAATATGAAGGAAGCCCTAGAAAAGTGTGGTGGCAGTTCTTTGGAGACAATGTTGGAGAAACAGTTGAAATTGGAAATTTTGATCCTAAAATATCTACCTTCTGGATTGAATCTGGTAAGCTGAAAGGAGTTCTTCTTGAAAGTGGGAGCCCTGAGGAATTTCAACTCCTGCCTAAACTTGCCAGAAGTCAGCCTCTGATTGATAAAGCCAAACTTCAAAATGCAACATCAGTGGAGGAGGCCCTAGAGATTGCTCGGGAATCCTTGCAAGGCGAAGCTGCTGTCTAG 1467 0.4526 MPSPSVRRLTMAAISNSLSLKHSFSLSRAPPSSSSIKFKFRRCYAAFANENREYVIVGGGNAAGYAARTFVEHGMADGRLCIVTKEPYAPYERPALTKAYLFPPDKKPARLPGFHTCVGSGGERQTPGWYKENGIEMLYEDPVKDIDIEKHTLTTSSGKLLKYGSLVIATGCTASRFPEKIGGNLPGVHYIRDVGDADALILSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEDHLLQRLFTPSLARRYEELYQKNGVKILKGASIKNLEAGSNGHVAAVKLGDGSLVEADTVIIGIGAKPAVTPFERVGLNTEVGGIQVDGQFRTSTPGIFAVGDVAAFPLKIYNRISRVEHVDHARRSAQHCVKALLSAQTHTYDYLPYFYSRIFEYEGSPRKVWWQFFGDNVGETVEIGNFDPKISTFWIESGKLKGVLLESGSPEEFQLLPKLARSQPLIDKAKLQNATSVEEALEIARESLQGEAAV 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00170 488 PRINTS Pyridine nucleotide disulphide reductase class-I signature 53 75 - -
Gma08g00170 488 PRINTS Pyridine nucleotide disulphide reductase class-I signature 209 234 - -
Gma08g00170 488 PRINTS Pyridine nucleotide disulphide reductase class-I signature 297 311 - -
Gma08g00170 488 PRINTS Pyridine nucleotide disulphide reductase class-I signature 337 344 - -
Gma08g00170 488 PANTHER APOPTOSIS-INDUCING FACTOR 1 39 487 - -
Gma08g00170 488 Gene3D - 55 370 IPR036188 -
Gma08g00170 488 PRINTS FAD-dependent pyridine nucleotide reductase signature 55 74 - -
Gma08g00170 488 PRINTS FAD-dependent pyridine nucleotide reductase signature 163 181 - -
Gma08g00170 488 PRINTS FAD-dependent pyridine nucleotide reductase signature 209 227 - -
Gma08g00170 488 PRINTS FAD-dependent pyridine nucleotide reductase signature 296 312 - -
Gma08g00170 488 PRINTS FAD-dependent pyridine nucleotide reductase signature 322 344 - -
Gma08g00170 488 SUPERFAMILY FAD/NAD(P)-binding domain 49 374 IPR036188 -
Gma08g00170 488 PANTHER MONODEHYDROASCORBATE REDUCTASE, CHLOROPLASTIC/MITOCHONDRIAL 39 487 - -
Gma08g00170 488 Gene3D - 177 304 IPR036188 -
Gma08g00170 488 Coils Coil 465 485 - -
Gma08g00170 488 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 367 IPR023753 GO:0016491
Gma08g00170 488 Gene3D - 387 474 IPR016156 GO:0016491|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00170 Gma-Chr8 1466318 1473161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00170 160 386 Acyl Lipid Metabolism Gene Families AT1G48030 25.311 1.73e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00170 K08232 - gmx:100819919 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00170 08 1466318 1473161 Gma08g00170 08 1466318 1473161 ECH
Gma05g02067 05 41917166 41930488 Gma08g00170 08 1466318 1473161 GST