Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02067 ATGCCTGCAACAACAGAGAACAACCAAGGCTCATTCCTCGGCCGAATAAGCATCCGCAGAAATCAAGTAATGTCCATGGACGGAAGCCACGACCAAGAGGTGGAAGACCTGGAGCTTTTTCAGAAGCACGTGGGAGACCGCTTCTCGGAGCTCTTATCCTCGACCAACACCTCCTCCGGCGACGCGCTTCTCTCCATCGCGTGGCTCCGCAGGATCCTCGACGAGTTCCTCTGCTGCGAGGCCGAATTCAAAGCCGTCGTCCTAATGGGCCGCGACCCTTCCCAGATCGCGAAGCCACCGCTGGACAAGGTCCTCCCGGAGCTCCTCGACCGCGTCGTGAAGTCCCTCGACGTCTGCAATGCCGTCACCCTCGGCCTCGACGCCGTCAAGAACCTCCAGCGCCTCGCCGAGATCGCCGTCGCCGCCCTCGACCAGACACCCCTGGGCGACGGCCAGGTCCGCCGCGCCAAGAAGGCGCTCTCCGCCCTCGTCGCCGCCATGCTGCACGACGACAGCAATGCCGCCGCCAAGGGAACCGAACGCACCCGATCCTTCGGGCGGCGCGCCGGAAACAACACCAACAGCGGCAAGTACAAGTCGCTGTCGTGGAGCATGGCGAAGAACTGGTCCGCGGCGAAGCAAATCCACGCGATGATATCGAATCTGGCGGCGCCACGTGGCGCGGAGTCCTCGGGATTGGCGCAACCGATCTACATGATGAGCAGCGTGTTGGTGTTGGTGATGTGGACTCTGGTTGCGGCGGTACCATGCCAGGAGAGGAATGGGCTGGGGACTCATTTTCCTCTGCCGAGGCAATTGGGCTGGGCCCAGCCCATGATAGGCCTGCAGGAGAAGATCGCGGAGGAGTGGAAGAAGAAGGAGAAGAAGGGGAACGTGGGGTTGTTGGAGGAGATGCAGAGGATGGACAAGCTGGGACAGTCCCTGGTGGAGTTCGCAGACTCCTTTCAGTTCCCAGCCGAAGCGGAGCGTTTGGATGAGGTCAAGAAGCACGTCGAGGAATTGGGGGACATTTGTAAAAAAATGGATGAAGGCTTGGAACCTTTGCAGCAGCAGATTAGAGAAGTCTTTCACAGGCTCGTACGTGATGCTGCGCGCACTTTCGTTGAGCATGGAATGGCCGATGGTCGTCTCTGTATTGTAACCAAAGAGCCTTATGCACCTTACGAGCGTCCCGCTCTGACGAGAGCGTATTTGTTCCCGCCGGATAAGAAACCAGCACGCCTTCCCGGTTTTCACACTTGTGTTGGATCCGGTGGAGAGAGGCAGACTCCGGAGTGGTATAAAGAGAATGTGATAGAGATGTTGTATGAAGATCCAGTAAAAGATATTGATATTGAAAAGCATACATTGACAACAAGTTCTGGAAAACTTCTGAAGTATGGTTCGCTTATTATTGCTACAGGATGCACGGCATCAAGGTTTCCAGAGAAGATTGGGGGAAACCTACCTGGTGTTCACTATATTCGGCATGTTGCAGATGCTGATGCACTAATTTTATCATTGGAAAAAGCAAAAAAGGTTGTAGTTGTCGGAGGTGGTTATATAGGAATGGAGGTTGCTGCTGCAGCTGTTGGTTGGAAACTTGATGCAACAATCATATTTCCAGAAGATGACCTTTTGCAAAGACTGTTTACTCCTTCTCTTGCTCGGAGATATGAAGAACTCTATCAAAAGAATGGAGTCAAAGTCTTGAAGGTATTTCCTCCTTCCCTGTTCTTCTCTCTTTCTTCCCATTATTCTGGTTCTAATGGACATGTAGCTGCTGTGAAACTTGGAGATGGATCTATTTTGGAGGCGGATACGGTAATTATAGGCATTGGAGCAAGACCTGCTGTAAGCCCCTTTGAGAGGGTGGGCCAGAATACAGATGTTGGTGGTATACAGGTTGATGGTCAGTTCCGGACAAGCACTCCTGGAATCTTTGCTGTTGGTGATGTAGCAGCTTTTCCTTTGAAGATCTATAACCGTATCTCTCGAGTTGAGCATGTAGATCATGCCCGTCGCTCTGCACAGCACTGTGTGAAAGCATTACTCAGTGCACAAACTCACACGTATGACTATCTTCCATACTTCTATTCAAGGATTTTTGAATATGAAGGAAGCCCTAGAAAAGTGTGGTGGCAGTTCTTTAGAGACAAGGTTGGAGAAACAGTTGAAATTGGAAATTTTGATCCTAAAATAGCTACCTTCTGGATTGAATCTGGTAAGCTGAAAGGAGTTCTTCTTGAAAGTGGGAGCCCTGAGGAATTTCAACTCCTGCCTAAACTTGCCAGAAGTCAGCCTCTGATTGATAAAGCCAAACTTCAAAATGCAACTTCAGTAGAGGAGGCCCTAGAGATTGCTCGAGGATCCTTGCAAGGCGAAGCTGTTGTCTAG 2397 0.5152 MPATTENNQGSFLGRISIRRNQVMSMDGSHDQEVEDLELFQKHVGDRFSELLSSTNTSSGDALLSIAWLRRILDEFLCCEAEFKAVVLMGRDPSQIAKPPLDKVLPELLDRVVKSLDVCNAVTLGLDAVKNLQRLAEIAVAALDQTPLGDGQVRRAKKALSALVAAMLHDDSNAAAKGTERTRSFGRRAGNNTNSGKYKSLSWSMAKNWSAAKQIHAMISNLAAPRGAESSGLAQPIYMMSSVLVLVMWTLVAAVPCQERNGLGTHFPLPRQLGWAQPMIGLQEKIAEEWKKKEKKGNVGLLEEMQRMDKLGQSLVEFADSFQFPAEAERLDEVKKHVEELGDICKKMDEGLEPLQQQIREVFHRLVRDAARTFVEHGMADGRLCIVTKEPYAPYERPALTRAYLFPPDKKPARLPGFHTCVGSGGERQTPEWYKENVIEMLYEDPVKDIDIEKHTLTTSSGKLLKYGSLIIATGCTASRFPEKIGGNLPGVHYIRHVADADALILSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDATIIFPEDDLLQRLFTPSLARRYEELYQKNGVKVLKVFPPSLFFSLSSHYSGSNGHVAAVKLGDGSILEADTVIIGIGARPAVSPFERVGQNTDVGGIQVDGQFRTSTPGIFAVGDVAAFPLKIYNRISRVEHVDHARRSAQHCVKALLSAQTHTYDYLPYFYSRIFEYEGSPRKVWWQFFRDKVGETVEIGNFDPKIATFWIESGKLKGVLLESGSPEEFQLLPKLARSQPLIDKAKLQNATSVEEALEIARGSLQGEAVV 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02067 798 PANTHER APOPTOSIS-INDUCING FACTOR 1 370 796 - -
Gma05g02067 798 Pfam Protein ROH1-like 6 370 IPR008511 -
Gma05g02067 798 Pfam Pyridine nucleotide-disulphide oxidoreductase 380 677 IPR023753 GO:0016491
Gma05g02067 798 Gene3D - 481 614 IPR036188 -
Gma05g02067 798 SUPERFAMILY FAD/NAD(P)-binding domain 432 684 IPR036188 -
Gma05g02067 798 Gene3D - 370 680 IPR036188 -
Gma05g02067 798 PRINTS FAD-dependent pyridine nucleotide reductase signature 467 485 - -
Gma05g02067 798 PRINTS FAD-dependent pyridine nucleotide reductase signature 606 622 - -
Gma05g02067 798 PRINTS FAD-dependent pyridine nucleotide reductase signature 632 654 - -
Gma05g02067 798 PRINTS FAD-dependent pyridine nucleotide reductase signature 513 531 - -
Gma05g02067 798 PANTHER MONODEHYDROASCORBATE REDUCTASE, CHLOROPLASTIC/MITOCHONDRIAL 370 796 - -
Gma05g02067 798 Gene3D - 697 783 IPR016156 GO:0016491|GO:0050660
Gma05g02067 798 PRINTS Pyridine nucleotide disulphide reductase class-II signature 468 476 - -
Gma05g02067 798 PRINTS Pyridine nucleotide disulphide reductase class-II signature 509 533 - -
Gma05g02067 798 PRINTS Pyridine nucleotide disulphide reductase class-II signature 642 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02067 Gma-Chr5 41917166 41930488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02067 464 696 Acyl Lipid Metabolism Gene Families AT1G48030 27.917 1.78e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02067 K08232 - gmx:100819919 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02067 05 41917166 41930488 Gma05g02067 05 41917166 41930488 ECH
Gma05g02067 05 41917166 41930488 Gma08g00170 08 1466318 1473161 GST