Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00152 ATGGCTCGGTTCGTTCTTCCATCGAAGACACTGACCTTTTCGAGGAACACTCTTCTGGGTTTGATCTCCCCTGCTCCTGTTAATTGCAGTGTTTGTTATTTTCAGAATACAGCAAGAAGGAGCATCAGATTCAAGCATTTCCTTGCTTCAGAGGTCAATTTCCGAAAGAAGTATTGCCCATTATATTCTTCACTATCAAGGGTCAAGCAAGTAAGTAGGAGACTACTTTGTTCAGTTGCCACAGAGGATTCACCAAAGCAAGTTGAAGAATCCAAAATGGAGACACCAAGGGAAATATTCTTAAAGGATTACAAGATGCCTGATTACTACTTTGACACTGTAGATCTGAAATTTACCTTGGGAGAGGAGAAGACCATAGTTAGTTCTAAAATTGCTGTGTATCCTCGCATTGAAGGTTCTACTCCCCCACTAGTTTTAGATGGACAGGACTTATCTTTAGTTTCAATTCACCTGAATGGCAAGGCTTTGAAGGAGGAAGATTATCATTTGGATGCACGCCATCTCACAATCCAATCACCTCCTAGTGGTAAATATGATCTTGAAATTGTTACAGATATTTGTCCACAGAAAAACACATCATTAGAGGGACTTTACAAATCATCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGCTTCCGTAAAATTACATTTTTTCAGGATCGACCTGATATAATGGCAAAATATACAGTTCGCATCGAGGCAGATAAATCACTGTATCCAGTGTTATTGTCTAATGGAAACCTAGCTGAACAAGGTGACTTAGAGGATGGCAGGCATTATGCTGTTTGGGAGGACCCCTTCAAGAAACCTTCTTATCTGTTTGCCTTGGTTGCCGGGCAATTGCAGAGCAGAGATGACACATTTGTTACCCGTTCAGGGAGGAAGGTGTCCCTTAGGATATGGACACCTGCAGATGATGTACCTAAGACTGCACATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGACCTGGATCTCTTCAATGTTGTTGCTGTCCCAGATTTTAACATGGGAGCCATGGAAAACAAGAGCTTGAATATTTTCAATTCAAAGCTTGTATTGGCCTCTCCAGAAACTGCTACTGATGCAGACTATGCTGCAATATTGGGAGTTATTGGCCATGAGTATTTCCACAACTGGACTGGCAACAGAGTGACATGTCGCGACTGGTTCCAGCTTAGCCTGAAGGAAGGTCTCACTGTTTTTCGTGATCAGGCACAGCCTTTTTACCCGTTTCCTATGTTTCAATTTAGACATCACATTACTTTTGAATTTTCATCTGACATGGGAAGTTGTACTGTAAAGCGGATTGCTGATGTTTCAAAACTTAGAAATTACCAGTTTCCACAGGATGCAGGTCCTATGGCCCATCCAGTGCGACCACACTCTTACATCAAGGGGGCTGAAGTTGTGAGAATGTACAAAACCTTGCTAGGAAGTCAAGGGTTCCGAAAAGGCATGGATCTTTATTTTAAGAGACATGATGGCCAAGCTGTAACATGTGAAGATTTTTTTGCCGCCATGCGAGATGCAAATGATGCAGATTTTGCAAATTTCTTGCTATGGTATTCTCAAGCTGGGACCCCTGTTGTCATAGTAAATACTTCTTATAATCCAGAAGCACATACTTTTTCTTTAAAATTTAGTCAAGATATACCACCAACCCCAGGGCAATCAGTTAAGGAACCCACATTCATTCCTGTTGCAGTGGGTTTGCTTGATTCCATGGGAAAGGACATTCCTCTTTCAACTGTTTACCATAATGGTACTATGCAATCTGTTTCAAGCAATGATCAATCAGTCTGCACTACAGTCCTTAGAGTGACCAAGAAAGAGGAAGAGTTTGTATTCACCGATATATTTGAAAGGCCTGTTCCTTCTTTGTTAAGAGGATACAGTGCTCCTATTCGTCTGGAATCTGATCTCACTGATAGCGACCTGTTTTTCTTACTAGCCAATGATTCCGATGAATTCAACCGTTGGGAGGCTGGACAAGTTTTGGCACGGAAGTTGATGCTTAACTTAGTGGATGATTTGCAACGTAACAAACCATTGGTTTTAAATTCCAATTTTGTTCAAGGGTTCAAACGTATTTTATGTGACTCAAGTCTGGACAAAGAGTTTGTGGCAAAGGCAATAACTTTGCCTGGTGAGGGAGAAATAATGGATATGATGGGGGTTGCAGATCCTGATGCTGTTCATACTGTTCGGACTTTCATCAGGAAGCAGCTTGCAAGTGAACTGAGATCAGAGTTCCTCAGCACAGTGGAAAATAACAGGAGCTCAGAAGAATATGTCTTCAATCACTCAAACTTGGCCAGGCGTGCTCTGAAGAATGTTGCTCTTGCTTATCTTGGATGCCTTGAGGAAAAAGAATTCACCGATCTTGTGTTGCATGAGTATAAAACTGCTACAAATATGACTGAGCAGTTTGCTGCCTTGGCTGCCATAGCTCAGAACCCTGGTAAAACCCGTGATGATGTTCTTGATGACTTTTATGGCAAGTGGCAGCATGATTTCTTGGTGGTGAACAAATGGTTTGCTCTTCAAGCAATGTCTGACATTCCTGGTAATGTTGAGAATGTGCGGAAACTGTTAAGCCACCCAGCATTTGATCTGCGCAATCCCAACAAAGTGTACTCTCTCATTGGAGGTTTCTGTGGGTCTCCGGTGAACTTTCATGCAAAGGATGGGTCAGGCTACAAGTTTTTGGGAGAGATTGTGCTGCAACTTGACAAGCTAAATCCTCAGGTAGCCTCGAGAATGGTGTCAGCCTTCTCAAGATGGAGGCGTTATGATGAAGACAGACAAAAGCTTGCAAAGGCGCAGTTGGAGAGGATCATGTCTACTAATGGACTATCGGAGAATGTGTTTGAGATAGCTTCGAAAAGCTTAGCTGCCTAA 2958 0.4216 MARFVLPSKTLTFSRNTLLGLISPAPVNCSVCYFQNTARRSIRFKHFLASEVNFRKKYCPLYSSLSRVKQVSRRLLCSVATEDSPKQVEESKMETPREIFLKDYKMPDYYFDTVDLKFTLGEEKTIVSSKIAVYPRIEGSTPPLVLDGQDLSLVSIHLNGKALKEEDYHLDARHLTIQSPPSGKYDLEIVTDICPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFFQDRPDIMAKYTVRIEADKSLYPVLLSNGNLAEQGDLEDGRHYAVWEDPFKKPSYLFALVAGQLQSRDDTFVTRSGRKVSLRIWTPADDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNVVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQAQPFYPFPMFQFRHHITFEFSSDMGSCTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLLWYSQAGTPVVIVNTSYNPEAHTFSLKFSQDIPPTPGQSVKEPTFIPVAVGLLDSMGKDIPLSTVYHNGTMQSVSSNDQSVCTTVLRVTKKEEEFVFTDIFERPVPSLLRGYSAPIRLESDLTDSDLFFLLANDSDEFNRWEAGQVLARKLMLNLVDDLQRNKPLVLNSNFVQGFKRILCDSSLDKEFVAKAITLPGEGEIMDMMGVADPDAVHTVRTFIRKQLASELRSEFLSTVENNRSSEEYVFNHSNLARRALKNVALAYLGCLEEKEFTDLVLHEYKTATNMTEQFAALAAIAQNPGKTRDDVLDDFYGKWQHDFLVVNKWFALQAMSDIPGNVENVRKLLSHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLQLDKLNPQVASRMVSAFSRWRRYDEDRQKLAKAQLERIMSTNGLSENVFEIASKSLAA 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00152 985 Gene3D - 290 374 - -
Gma08g00152 985 Gene3D Neutral Protease Domain 2 375 544 IPR027268 -
Gma08g00152 985 PANTHER - 484 985 IPR012779 GO:0008270
Gma08g00152 985 PANTHER - 54 484 IPR012779 GO:0008270
Gma08g00152 985 TIGRFAM pepN_proteo: aminopeptidase N 103 983 IPR012779 GO:0008270
Gma08g00152 985 Pfam Peptidase M1 N-terminal domain 114 281 IPR045357 -
Gma08g00152 985 Gene3D tricorn interacting facor f3 domain 106 289 IPR042097 -
Gma08g00152 985 Pfam Domain of unknown function (DUF3458_C) ARM repeats 662 984 IPR024601 -
Gma08g00152 985 Pfam Peptidase family M1 domain 323 537 IPR014782 GO:0008237|GO:0008270
Gma08g00152 985 CDD M1_APN 103 542 - -
Gma08g00152 985 PRINTS Membrane alanyl dipeptidase (M1) family signature 408 420 IPR001930 GO:0006508
Gma08g00152 985 PRINTS Membrane alanyl dipeptidase (M1) family signature 389 404 IPR001930 GO:0006508
Gma08g00152 985 PRINTS Membrane alanyl dipeptidase (M1) family signature 271 286 IPR001930 GO:0006508
Gma08g00152 985 PRINTS Membrane alanyl dipeptidase (M1) family signature 353 363 IPR001930 GO:0006508
Gma08g00152 985 Pfam Domain of unknown function (DUF3458) Ig-like fold 545 658 IPR035414 -
Gma08g00152 985 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 299 551 - -
Gma08g00152 985 Gene3D - 660 984 IPR037144 -
Gma08g00152 985 PANTHER BNAC06G01820D PROTEIN 484 985 - -
Gma08g00152 985 PANTHER BNAC06G01820D PROTEIN 54 484 - -
Gma08g00152 985 Gene3D - 545 658 IPR038438 -
Gma08g00152 985 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 96 287 IPR042097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00152 Gma-Chr8 1282298 1290860 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00152 K01256 - gmx:100803548 1914.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00152 08 1282298 1290860 Gma08g00152 08 1282298 1290860 ECH
Gma05g02048 05 41736879 41741198 Gma08g00152 08 1282298 1290860 GST