Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02048 ATGGCACGGTTGGTTCTGCCATCGAAGACATTGACTTTTTCGAGGAACACTCTTCTGGGTTTGATCTCCCCTGCTCCTCTTAAGGCTAATTGCAGTGTTAGTTATTTTCAGAATACAGCAAGAGGGAGCATCAGATTCAAGCATTTCCTTGCATCAGAGGTCACTTTCCGAAAGAAGTATTGCCCATTATATTCTTCACTACCAAGGGTCAAGCAAGTAAGTAGGCGACTAATTTGTTCAGTTGCCACAGAGGATTTACCAAAGGAAGTTGAAAAATCTAACATGGAGACACCAAGGGAAATATTCTTAAAGGATTACAAAATGCCTGATTACTACTTTGACACTGTGGATCTAACATTTTCCTTGGGAGAGGAGAAGACAATAGTCAGTTCTAAAATTGCTGTGTATCCTCGCATTGAAGGTTCTACTCCCCCTCTAGTTTTAGATGGACGAGACTTATCTTTAGTTTCAATTCACCTGAATGGCAAGGCTTTAAAGGAGGAAGATTATCATTTGGATGCACGCCATCTCACAATCCAATCACCTCCTAGTGGTAAATATGATCTTGAAATTGTTACAGATATTTGTCCACAGAAAAACACATCATTAGAGGGACTTTACAAATCATCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGCTTCCGTAAAATTACATTTTATCAGGATCGACCTGATATAATGGCAAAATATACAGTTCGCATTGAGGCAGATAAATCACTGTATCCAGTGTTATTGTCTAATGGAAACCTAGCTGAACAAGGTGACTTAGAGGATGGCAGGCACTATGCTGTTTGGGAGGACCCCTTCAAGAAACCTTCTTATCTGTTTGCCTTGGTTGCTGGGCAATTGCAGAGCAGAGATGACACATTTATCACCCATTCAGGGCGGATGGTGTCCCTTAGGATATGGACACCTGCAGATGATGTACCTAAGACTGTACATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGACCTGGATCTCTTCAATGTTGTTGCTGTCCCAGATTTTAACATGGGAGCCATGGAAAACAAGAGCTTGAATATTTTCAATTCAAAGCTTGTATTGGCCTCTCCAGAAACTGCAACTGATGCAGATTATGCTGCAATATTGGGAGTTATTGGCCATGAGTATTTCCACAACTGGACTGGCAACAGAGTGACATGTCGCGACTGGTTCCAGCTTAGCCTGAAGGAAGGTCTCACTGTTTTTCGTGATCAGGAATTTTCATCTGACATGGGAAGTCGTACTGTAAAGCGGATTGCTGATGTTTCAAAACTTAGAAATTACCAGTTTCCACAGGATGCAGGTCCCATGGCCCATCCAGTGCGACCACACTCTTACATCAAGATGGACAACTTCTACACAGGCAAGCCTTATTTTTATAGCTTCAATTGA 1452 0.4167 MARLVLPSKTLTFSRNTLLGLISPAPLKANCSVSYFQNTARGSIRFKHFLASEVTFRKKYCPLYSSLPRVKQVSRRLICSVATEDLPKEVEKSNMETPREIFLKDYKMPDYYFDTVDLTFSLGEEKTIVSSKIAVYPRIEGSTPPLVLDGRDLSLVSIHLNGKALKEEDYHLDARHLTIQSPPSGKYDLEIVTDICPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTVRIEADKSLYPVLLSNGNLAEQGDLEDGRHYAVWEDPFKKPSYLFALVAGQLQSRDDTFITHSGRMVSLRIWTPADDVPKTVHAMYSLKAAMKWDEDVFGLEYDLDLFNVVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTGKPYFYSFN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02048 483 Gene3D tricorn interacting facor f3 domain 108 291 IPR042097 -
Gma05g02048 483 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 98 289 IPR042097 -
Gma05g02048 483 Gene3D - 292 376 - -
Gma05g02048 483 Gene3D Neutral Protease Domain 2 377 481 IPR027268 -
Gma05g02048 483 Pfam Peptidase family M1 domain 325 479 IPR014782 GO:0008237|GO:0008270
Gma05g02048 483 PRINTS Membrane alanyl dipeptidase (M1) family signature 223 238 IPR001930 GO:0006508
Gma05g02048 483 PRINTS Membrane alanyl dipeptidase (M1) family signature 273 288 IPR001930 GO:0006508
Gma05g02048 483 PRINTS Membrane alanyl dipeptidase (M1) family signature 355 365 IPR001930 GO:0006508
Gma05g02048 483 PRINTS Membrane alanyl dipeptidase (M1) family signature 410 422 IPR001930 GO:0006508
Gma05g02048 483 PRINTS Membrane alanyl dipeptidase (M1) family signature 391 406 IPR001930 GO:0006508
Gma05g02048 483 PANTHER BNAC06G01820D PROTEIN 56 478 - -
Gma05g02048 483 PANTHER - 56 478 IPR012779 GO:0008270
Gma05g02048 483 CDD M1_APN 105 474 - -
Gma05g02048 483 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 301 479 - -
Gma05g02048 483 Pfam Peptidase M1 N-terminal domain 117 283 IPR045357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02048 Gma-Chr5 41736879 41741198 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02048 K01256 - gmx:100775476 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02048 05 41736879 41741198 Gma05g02048 05 41736879 41741198 ECH
Gma05g02048 05 41736879 41741198 Gma08g00152 08 1282298 1290860 GST