Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00145 ATGGCGTTATCATTTCTTGGTGTTCCGCACTTTGTGTCACCTGCAACTACATCATCCACTGTAAAGTTGCAACACTTTCGCAAACCTTGTACTTGTAGTTCTACACCCTTCTTCCGTCTCCTTTCATATCCCTTTCTTCACGTTCGGGCTCCGCGGGCCATTGGGCCCGATGGGAAGTTCTACCCAAGCCCAGCCGACGACGACCCACCGGAAGCTGACGAGGATTCCTCCCACGGCTTCTCCACCTTCCAGCAAATCCAGCGCCAAGCAGAACGCGCGCGCCAAATCGAAGAAGACGACTACAAGAAGAACCAATCCACGTACCTCGCCGCCATCGCCGACGTCGAAGACGCCCCCGACAACGCCCCCTTCGACTCCTCTGAGGATGACCTCTTTGGCGAAATCGACAAAGCCTTAGCTCTCAAGCGCAAAGAATTCGTCTCCCAAGGCCTTCTCCAACCCAATCCCCCCAAACAGGATCCACTCCCCGTCGCCGCTGTCGACGAGCTCCAACCAGACGAGCTCGGCGATTTGGCTGAAATCGAACGCCTCCAGGGACTCACCGCTGACGGTAACGGTAACATAAGCAACTCAACCGAATCTCCGTTTGAATTCGATTTTGACAGTTATGGTAAAACTAAGGTTAGGATTGTAGAAGGGAAGTTTAAGATGAGTTTGGCTGAGCTTCTAGACGAGAGTAAGGTCGTCCCGGTGTCGGTTTCCGGTGATTTGGAAATCGAAATTACCGGAATTCAGCACGATTCGAGGATTGTTAGTTCCGGTGACTTATTTGTGTGTTGTGTGGGGAGTAAAACCGATGGGCATTTGTTTTTGTCCGAGGCTGATAAGAGAGGCGCGGTTGCGGTTGTGGCTAGTAAAGAGATTGATATTGAGGATACTTTGGGGTGTAAGGCTTTGGTTATTGTGGAAGATACTAATGCTGTTCTTCCTGCGTTGGCTGCCTCGTTTTATAAACAGCCTTCTACGAAAATGGCTGTGATTGGGATAACCGGGACTTATGGCAAAACGACCACCACCTGCTTGATTAAAAGTTTGTATGAGTCGATGGGGCTGCGAACCGGGATGTTAAACTCGGTTGCTTCTTATGTCCATGGGGACAATAAGTTGGAGTTGGGTAATGCAGTGCCGGATGCTGTTTTGGTTCAGAATTTGATGGCCAAGATGATTCACAATGGAACTGAGGTGGTGGTCATGGAGGCGGGTGCTCATGGGTTGGGGGATGGGAAGTATGATGAGGTTGACTTTGATATTGCGGTCTTCACTAATTTGAGTCAGGAGGAGGAGGGAGATATAGATGCGCAGGCTAAGTTGTTCTCGAGAATGGTGGATCCGGAGAGGCATAGGAAGGTTGTTAACATTGATGATCCGAATGCACCCTTTTTTGTGTCGCAGGGGAACCGGGAAGTTCCTGTTGTGACATTTGCGATGGAGAATAAGGAGGCAGATGTTCATCCCTTGAAGTTTGAGCTTTCTTTGTTTGAGACGCAGGTGTTGGTTAATACTCCCACGGGGATACTGGAGATTTCGTCCGGTTTGCTTGGGAAGCATAATATTTACAACATCCTTGCTGCTGTGGCAGTTGGGATTGCTGTTGGGGCACCCTTGGAGGACATTGTTAGAGGGATTGAAGAGGTTGATGCGGTTCCTGGGAGGTGTGAGTTGATTGATGAGGAACAAGCATTTGGGGTGATAGTGGACTATGCCAGTACTCCTGATGCGTTGTCTAGATTGCTCGATTCTGTTAGAGAGCTTGGACCTCGCAGGGTTATAACTGTCATTGGATGCTGTGGTGAGGGCGACAGGGGGAAGAGGCCCGTGATGACCAAGATAGCAACAGATAAAAGTGAAGTGACCATGCTGACATCTGACAATCCCAAGAGTGAAGATCCATTGGACATATTGGATGATATGTTAGCTGGGGTAGGATGGACGATGCAGGACTACCTGAAATATGGAGAGAATGACTATTATCCACCTCTTCCAAATGGTCATAGACTTTTTCTCCATGACATTAGGAGGGTAGCTGTGCGAGCTGCAGTTGCAATGGGTGAGGAGGGCGATGTGGTTGTGGTTGCTGGCAAAGGCCATGAAACATATCAAGTAGAAGGTGATAAAAAGGAATTCTTTGATGATCGAGAAGAGTGCCGAGAGGCATTGCAGTATGTTGATGAGCTTCACCAAGCTGGAATAGATACAAGTGAATTTCCATGGCGGTTACCAGAGAGTCATTGA 2253 0.4896 MALSFLGVPHFVSPATTSSTVKLQHFRKPCTCSSTPFFRLLSYPFLHVRAPRAIGPDGKFYPSPADDDPPEADEDSSHGFSTFQQIQRQAERARQIEEDDYKKNQSTYLAAIADVEDAPDNAPFDSSEDDLFGEIDKALALKRKEFVSQGLLQPNPPKQDPLPVAAVDELQPDELGDLAEIERLQGLTADGNGNISNSTESPFEFDFDSYGKTKVRIVEGKFKMSLAELLDESKVVPVSVSGDLEIEITGIQHDSRIVSSGDLFVCCVGSKTDGHLFLSEADKRGAVAVVASKEIDIEDTLGCKALVIVEDTNAVLPALAASFYKQPSTKMAVIGITGTYGKTTTTCLIKSLYESMGLRTGMLNSVASYVHGDNKLELGNAVPDAVLVQNLMAKMIHNGTEVVVMEAGAHGLGDGKYDEVDFDIAVFTNLSQEEEGDIDAQAKLFSRMVDPERHRKVVNIDDPNAPFFVSQGNREVPVVTFAMENKEADVHPLKFELSLFETQVLVNTPTGILEISSGLLGKHNIYNILAAVAVGIAVGAPLEDIVRGIEEVDAVPGRCELIDEEQAFGVIVDYASTPDALSRLLDSVRELGPRRVITVIGCCGEGDRGKRPVMTKIATDKSEVTMLTSDNPKSEDPLDILDDMLAGVGWTMQDYLKYGENDYYPPLPNGHRLFLHDIRRVAVRAAVAMGEEGDVVVVAGKGHETYQVEGDKKEFFDDREECREALQYVDELHQAGIDTSEFPWRLPESH 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00145 750 Hamap UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 224 726 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Gma08g00145 750 Pfam Mur ligase family, glutamate ligase domain 555 638 IPR004101 GO:0009058|GO:0016881
Gma08g00145 750 Gene3D - 225 325 - -
Gma08g00145 750 PANTHER UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE MURE HOMOLOG, CHLOROPLASTIC 203 740 - -
Gma08g00145 750 SUPERFAMILY MurD-like peptide ligases, catalytic domain 307 566 IPR036565 GO:0005524|GO:0009058
Gma08g00145 750 TIGRFAM murE: UDP-N-acetylmuramyl-tripeptide synthetase 246 727 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Gma08g00145 750 SUPERFAMILY MurD-like peptide ligases, peptide-binding domain 555 727 IPR036615 GO:0009058|GO:0016881
Gma08g00145 750 Gene3D - 327 558 IPR036565 GO:0005524|GO:0009058
Gma08g00145 750 Gene3D - 561 737 IPR036615 GO:0009058|GO:0016881
Gma08g00145 750 PANTHER MUR LIGASE FAMILY MEMBER 203 740 - -
Gma08g00145 750 Pfam Mur ligase middle domain 336 534 IPR013221 GO:0005524|GO:0009058|GO:0016881
Gma08g00145 750 MobiDBLite consensus disorder prediction 56 101 - -
Gma08g00145 750 Pfam Mur ligase family, catalytic domain 247 324 IPR000713 GO:0009058|GO:0016881
Gma08g00145 750 SUPERFAMILY MurE/MurF N-terminal domain 224 327 IPR035911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00145 Gma-Chr8 1223480 1227315 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00145 - - gmx:100776096 1460.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00145 08 1223480 1227315 Gma08g00145 08 1223480 1227315 ECH
Gma05g02040 05 41674109 41678063 Gma08g00145 08 1223480 1227315 GST