Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00137 ATGGGAAATCGACGCTTCACTCAGGTCGCAACCAGCGAAGATGAGGACGAAGCACCGCCGCCTCCTCCTCCTCCCAAGCAGCAATCGTCGGTCAGTGCCCCCGAAGAGAACCGTTCGAAGCAGCAGCAGCGCAAGAGGAAGAGAATGAAGCTTCaagaagaagaggaagaggaagaggagaaagaggaagagaagaagaagaagaagagaaagaTCAAAGACAAGCAAGAAGAGAGATCGAACGAAGAAGAGGAACCGCCGCAGGAAGACGCAAAGCCCATTGGCGAACCGGTTAGGTTATCCGGAAAGGGAAGGGGCCGCAAAAAGCATTACGAATCCTTCGAGTACGACGGAAACCAATACATGCTGGAGGACCCTATACTTCTCACGCCTGAGGACAAAGATCAAAAGCCGTATGTGGCTATTATCAAGGACATTACGCAATCCCTAAATGGCAGCATGATGGTCACAGGACAGTGGTTTTATCGTCCCGAAGAAGCTGAAAGAAAAGGTGGTGGCAGCTGGCAATCACGTGACACAAGGGAGCTGTTTTATAGTTTCCACCGTGATGATGTTCCTGCAGAATCTGTTATGCATAAGTGTGTGGTGCATTTTGTTCCCATACACAAACAGCTCCCAAATCGTAAGCAGCATCCTGGGTTTATTGTGCAAAAGGTGTATGACACAGTAGAAAGGAAACTCTGGAAGCTTACTGATAAGGATTATGAGGACAATAAACAGCAAGAAATTGATGAGCTTGTTCAGAAAACTCTTAAACGTTTGGGCGAACTACTTGACATTGAGCCCGAAGAACCTGTTGCTGATCAGGAAGATCTGATGAAAAATAAAAGAATCTTAAGGAAAAAGAGCATTTCACCTCTTGATGTTTCGAAGGAGGAGGAAACAACTCGTAAGGGGGACCAACCTTTGAAACCCGAAACACCATGGAGTTGTATAAATAATGCCTCAGAACATTATCGCATATTAGTAGATTTCAATGTTCTAACAGGAGATACTCATCGTGACAAATGTTTGGAGAAGTTGCTTCAAAGTGTTGAATTCATGTTTAATTCTGATGACAGCATAAAGAGGGAAGAGAAAGGAAATGACAATTCTGATGCAACCAACAATGGAAGCAATAACAAAAGTTTAGAATCTGTTAATGAATGTAAAGACAAGGTTCAAAAGAGTTCAAAGCCTTTTGTTTGGCCAGATGATGCTGTTCCAGCTGTAGTTGCTCTGGAAAAAGCTTCACATGATACCTTATCATCGGATTATCAGAAGTATAACCAAAAGCTACGGCAATTAGTATTTAATCTCAAGAACAATGCAATCCTAGCACGCCGCCTACTAAATGGAGAGTTGGAACCTTCTAAAATATTGAATATGACACCCAATGAGTTGAAGGAGGGTTTGACTGCAGAGGAAACAACCAAGAAGGAGCCTGATGAGTCACAACACATGCAGATGACGGGTGCCCGATGCCGCAGATGCACAGAGGGTAAGGTGGGCTTGAGGGATATTATCCACGCCGGACATGGTGATCGGTATCAGCTGGAATGTACTGGCTGTGGTTATTCCTGGTTTGCCTCCCGTGATGAGGTGTCTGAGCTGACTATAGATGCATCAGATTCAAAAAGAAGCGTAGGCACAGCGCCATGGGCCACTGCAAAATTTGAAGATGTTGAGAAGAAGCTGGTGAGTCCCCGCGAATCTGAAAAGAATGACATCTTTAAGAAAACAAGTGAAGCATATATGCCAGTTTTGGATGCCCAGAAATCATTTGGCAAATATAGGAAAGATGAAACCGTCCAAGCTTCAAAGCACGCTGACTAG 1836 0.4308 MGNRRFTQVATSEDEDEAPPPPPPPKQQSSVSAPEENRSKQQQRKRKRMKLQEEEEEEEEKEEEKKKKKRKIKDKQEERSNEEEEPPQEDAKPIGEPVRLSGKGRGRKKHYESFEYDGNQYMLEDPILLTPEDKDQKPYVAIIKDITQSLNGSMMVTGQWFYRPEEAERKGGGSWQSRDTRELFYSFHRDDVPAESVMHKCVVHFVPIHKQLPNRKQHPGFIVQKVYDTVERKLWKLTDKDYEDNKQQEIDELVQKTLKRLGELLDIEPEEPVADQEDLMKNKRILRKKSISPLDVSKEEETTRKGDQPLKPETPWSCINNASEHYRILVDFNVLTGDTHRDKCLEKLLQSVEFMFNSDDSIKREEKGNDNSDATNNGSNNKSLESVNECKDKVQKSSKPFVWPDDAVPAVVALEKASHDTLSSDYQKYNQKLRQLVFNLKNNAILARRLLNGELEPSKILNMTPNELKEGLTAEETTKKEPDESQHMQMTGARCRRCTEGKVGLRDIIHAGHGDRYQLECTGCGYSWFASRDEVSELTIDASDSKRSVGTAPWATAKFEDVEKKLVSPRESEKNDIFKKTSEAYMPVLDAQKSFGKYRKDETVQASKHAD 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00137 611 MobiDBLite consensus disorder prediction 469 492 - -
Gma08g00137 611 MobiDBLite consensus disorder prediction 472 487 - -
Gma08g00137 611 Gene3D - 321 470 IPR036575 GO:0006351
Gma08g00137 611 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 608 - -
Gma08g00137 611 MobiDBLite consensus disorder prediction 1 107 - -
Gma08g00137 611 SMART mid_6 373 478 IPR003618 GO:0006351
Gma08g00137 611 Coils Coil 37 85 - -
Gma08g00137 611 MobiDBLite consensus disorder prediction 363 391 - -
Gma08g00137 611 MobiDBLite consensus disorder prediction 296 315 - -
Gma08g00137 611 MobiDBLite consensus disorder prediction 38 54 - -
Gma08g00137 611 ProSiteProfiles BAH domain profile. 119 238 IPR001025 GO:0003682
Gma08g00137 611 Pfam BAH domain 120 236 IPR001025 GO:0003682
Gma08g00137 611 Pfam Transcription factor S-II (TFIIS), central domain 336 487 IPR003618 GO:0006351
Gma08g00137 611 SMART BAH_4 119 238 IPR001025 GO:0003682
Gma08g00137 611 CDD BAH_plant_3 101 247 - -
Gma08g00137 611 MobiDBLite consensus disorder prediction 61 92 - -
Gma08g00137 611 SUPERFAMILY Elongation factor TFIIS domain 2 335 469 IPR036575 GO:0006351
Gma08g00137 611 Gene3D - 27 227 IPR043151 -
Gma08g00137 611 ProSiteProfiles TFIIS central domain profile. 340 496 IPR003618 GO:0006351
Gma08g00137 611 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00137 Gma-Chr8 1157191 1162590 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00137 - - gmx:100787670 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00137 08 1157191 1162590 Gma08g00137 08 1157191 1162590 ECH
Gma01g02203 01 57264828 57269538 Gma08g00137 08 1157191 1162590 PCT