Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00128 ATGATAAGTCAATTAACTGCTTCAGGTTGCCAGCCTGCATTTTCAATTCAACTATTAGCTCAATTTCATAGAAGGCAGCTCTACTTCAAATGTGAATGTTTACAAAAGGGTGGAGCTTTTAAATTTAGGGGAGCCTGCAATGCTGTGTTCTCTCTCAATGATGAAGATGCTTCTAAAGGGGTTGTAACACACAGCAGTGGAAACCATGCTGCAGCATTGGCTTTGGCTGCAAAACTACAGGGGATCCCTTCGTATATTGTTATCCCAAAAAATGTGCCAACTTGCAAAATTGAAAATGTAAAGTGGTATGGTGGTCAGTTTGTCTGGTCTGAAGCCTCTGTTCAATCAAGGGAAGAAGTTGCCAACAAAGTGTGGCCAGAAACCGGTGCTATCTTTATACATCCATATAATGATGGACGCAAATTAAGTGGCCAGGGTACCATATCCTTAGAGATTCTGGAACAAGCACCACAAATAGATATGCTAGTGGTACTCATAAGTGGTGGTGGTTTGATATCAGGAATAGCATTGGCTGCCAAGTCCATTAACCCAGCTATTCGTATTTTTGCCGCTGAACCTAAAGGTGCTGATGATGCAGCACAATCTAAAGCAGCTGGGAGGATAATACGATTGCCTGAGACCAATACTATAGCTGATGGGCTTCGAGTATTTCTTGGAGATTTGACATGGCCTGTTGTACAAGATCTTGTTGAGGACATTATAACTGTTGAAGACGGTGAAATAATAAAAGCCATGAAACTGTTTTTTGAAATTCTTAAGGTTGTTGTAGAACCAAGTGGAGCAATTGGCCTTGCTGCTTTTCTATCCGATACTTTCCAGAAAAATCCTGCTTGGAAGGATTGTAACCATATAGGAATTGTAATTTCAGGAGGCAATGTTGATCTGGCCTTGCTTTGGGATTCTTTGAACAAAGGAAAGTGA 942 0.4098 MISQLTASGCQPAFSIQLLAQFHRRQLYFKCECLQKGGAFKFRGACNAVFSLNDEDASKGVVTHSSGNHAAALALAAKLQGIPSYIVIPKNVPTCKIENVKWYGGQFVWSEASVQSREEVANKVWPETGAIFIHPYNDGRKLSGQGTISLEILEQAPQIDMLVVLISGGGLISGIALAAKSINPAIRIFAAEPKGADDAAQSKAAGRIIRLPETNTIADGLRVFLGDLTWPVVQDLVEDIITVEDGEIIKAMKLFFEILKVVVEPSGAIGLAAFLSDTFQKNPAWKDCNHIGIVISGGNVDLALLWDSLNKGK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00128 313 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 32 45 IPR000634 GO:0006520|GO:0030170
Gma08g00128 313 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 12 304 IPR036052 -
Gma08g00128 313 Pfam Pyridoxal-phosphate dependent enzyme 12 279 IPR001926 -
Gma08g00128 313 Gene3D - 40 136 IPR036052 -
Gma08g00128 313 CDD Thr-dehyd 26 301 - -
Gma08g00128 313 PANTHER - 11 311 - -
Gma08g00128 313 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 11 311 - -
Gma08g00128 313 Gene3D - 17 301 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00128 Gma-Chr8 1082625 1087082 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00128 K12235 - gmx:100799758 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00128 08 1082625 1087082 Gma08g00128 08 1082625 1087082 ECH
Gma05g02023 05 41546203 41548937 Gma08g00128 08 1082625 1087082 GST