Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02023 ATGGAAGAAGAGAGCCAAATAACAAAGGGAAAATATGCTGCTGATATTTCTTCCATAAAAGAAGCACATGCCAGAATAAAATCATTGGTTCATAAAACTCCGCTTCTGTCCTCCAGCTCTCTGAATGCTATGTCAGGAAGGAAGCTCTACTTTAAATGTGAATGTTTACAAAAGGGTGGAGCTTTTAAATTTAGGGGAGCCTGCAATGCTGTGTTTTCTCTCAATGATGAAGATGCTTCTAAAGGGGTTGTAACACACAGCAGTGGAAACCATGCCGCAGCATTGGCTTTGGCTGCAAAACTACGGGGGATCCCTTCGTATATTGTTATTCCAAAAAATGCCCCAACTTGCAAAATTGAAAATGTAAAGCGGTATGGTGGTCAGGTTGTCTGGTCTGAAGCCTCTGTTCAATCAAGGGAAGAAATTGCCAACAAAGTGTGGCAAGAAAGTGGTGCTATCTTTATACATCCATATAATGATGGACGCATATTAAGTGGCCAGGGTACCATATCCTTGGAGATTCTGGAACAAGCACCACAAATAGATACGCTAGTAGTACCCATAAGTGGTGGTGGTTTGATATCAGGAATAGCATTGGCTGCCAAGTCCATTAACCCAGCTATTCGTATTTTTGCTGCTGAACCTAAAGGTGCTGATGATGCAGCACAATCTAAAGCAGCTGGGAGGATAATACGATTGCCTGAGACCAACACTATAGCTGACGGGCTTCGAGCATTTCTTGGAGATTTCACATGGCCTGTTGTACGAGATCTTGTTGAGGAAATTATAACTGTTGAAGACAGTGAAATAATAAAAGCCATGAAACTGTGTTTTGAAATTCTTAAGGTTGTTGTAGAACCAAGTGGAGCAATTGGCCTTGCTGCTGTTCTATCCGATACTTTCCAGAAAAATCCTGCATGGAAGGATTGCAACCATATAGGAATAGTAGTTTCAGGAGGCAATGTTGATCTGGCCATGCTTTGGGATTCTTTGAACAAAGGAAAGTGA 1008 0.4167 MEEESQITKGKYAADISSIKEAHARIKSLVHKTPLLSSSSLNAMSGRKLYFKCECLQKGGAFKFRGACNAVFSLNDEDASKGVVTHSSGNHAAALALAAKLRGIPSYIVIPKNAPTCKIENVKRYGGQVVWSEASVQSREEIANKVWQESGAIFIHPYNDGRILSGQGTISLEILEQAPQIDTLVVPISGGGLISGIALAAKSINPAIRIFAAEPKGADDAAQSKAAGRIIRLPETNTIADGLRAFLGDFTWPVVRDLVEEIITVEDSEIIKAMKLCFEILKVVVEPSGAIGLAAVLSDTFQKNPAWKDCNHIGIVVSGGNVDLAMLWDSLNKGK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02023 335 Pfam Pyridoxal-phosphate dependent enzyme 29 303 IPR001926 -
Gma05g02023 335 Gene3D - 62 158 IPR036052 -
Gma05g02023 335 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 IPR000634 GO:0006520|GO:0030170
Gma05g02023 335 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 16 326 IPR036052 -
Gma05g02023 335 CDD Thr-dehyd 16 323 - -
Gma05g02023 335 PANTHER - 8 43 - -
Gma05g02023 335 PANTHER - 31 333 - -
Gma05g02023 335 Gene3D - 25 323 IPR036052 -
Gma05g02023 335 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 31 333 - -
Gma05g02023 335 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 8 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02023 Gma-Chr5 41546203 41548937 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02023 K12235 - gmx:100799758 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02023 05 41546203 41548937 Gma05g02023 05 41546203 41548937 ECH
Gma05g02023 05 41546203 41548937 Gma08g00128 08 1082625 1087082 GST