Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00126 ATGGAGGAAACTCCGTCTTCAGTTCCAGCGACGGCATCATGCTGGAGCAACGTGGTCAAGAAGCAGCCACCACCTCCACCGCAGCAGCACACCGAGCGAGTGTTGGTGGAAACCAGCGATTCCCCCAATGCCATCTCCGTAGCCGTCGTGGACGCCAACGCAGTCATCGAATCCGGCGAAAAGCTCCACGGCCTCGCCGACAAGTTCATCTCCATCCCCGAAGTCATGGAGGAAATCCGCGACCCCGTTTCCCGCCACAAACTCTCTTTCCTCCCCTTCACCATCCAAACCATGGAACCCTCCTCCGAATCCATCAACAAAGTTGTTAAATTTGCTAGGGCTACCGGTGACCTACAAACTCTTTCTGATGTTGATATCAAGCTCATAGCTTTGACTTATACTTTGGAGGGTCAAATTCATGGGACAAAACATATCAGGGATGCCCCTCCTCCTGTGCAAATGGTCAATGTGAAGAGGTTGCCTGAGAAGGACTTGCCTGGATGGGGTTCTAACGTGCCCAATTTGGATGAGTGGGAGGCGTTGGAACATGCCGAGGACGCGTCCAATTCCAATTCCAGGATCCTTCCTTTGCAGGACCTTAGCTTGAACATTGTTTCTCAAGATGAGCATTCTGTGGATGGTTCCGTGGAGCCTGTGAGTGAAGCTGATTTGGGGATTCAGGAGGGTGGTCAGAATGGTTTGACGAAGCCAAGGAGATATCTGCCTAAGAAAAAAGAGATAAAGATTGAGGGGAAGACGATGGTGGCTGATGGAATTGATGCGTCGCAGGGAGGGGTTGATGACAATGCTGGTGATTGGATGCCGGCTGTCAGTCGGAGTACTCATAGGAGATATCTAAGAAGGAAAGCTAGACGCGAGTATCACGAGTCGTTGTCAAGTAATCAAGATCAGCAAGAGTTGGAAGCAAATGTTGTTGATGGTAGTGTTGGTGAAGATGCTAGTGCTTTAAATCCGCCTGTTCATCAGAGGGATGAAGAACAACATATTGAAAATGCTGTGTTGGAGGATGGTAAGGTGGTTAAAGAGAACAAAGACAATGAAAGTATCTATGAAATTATGCAGCAAATGAGGCTGGAAGAAGGCTCACTTGAAGTTCTTGATGAGGAAAGTAAACCAAGTTCATTTCCTAAAGAACTCCAGTCAGACAATGCTGGATTGGTGGAAACCGCATCTGATGGCAATGCAACTGTGGTCAATAAACCATGTGACAGTGGGACAGATACAATTGATGGCCAATCAAATCAATTGGAGATTGCTAGCCAGACAAGTGAGGTTGCTGATTTTTCATGTGCAGATGATGATGATAGTGACCAAAGTTGGGTGGTTAGGTCTTTGTCTGAATCAAGTGTAGCCTGTATAACTGGTGACTTTGCAATGCAAAATGTTCTTCTACAAATGGGTTTACGCTTGCTGGCACCTGGAGGAACACAGATACACCAGCTGCACAGATGGATACTCAAGTGTCATGCCTGTTACACTGTTACTGGCGAGATTGGGAGGATTTTCTGTCCCAAATGTGGAAATGGTGGCACCTTAAGGAAGGTAGCTGTCACTGTTAATGAAAATGGAATAGTATTAGCTGCCCGTCGACCACGAGTTACATTACGTGGCACAAAGTTTTCATTGCCTTTACCCCAAGGTGGGAGGGATGCAGTCTCAAAGAACCTCATTCTCCGTGAAGATCAACTTCCTCATAGGGTACTTTATCCTAAAACGAAGAAAGCCAACAAGCAGGATGATGACTTCTTTACACCAGACAGTGTCTTCAGCCACCACACAGATAAGAAAGCTCCTTTCCAGCCTCCTGTAAGGAAAGCAATGGCAGTTTTCGGTGGGAGGAGAAATCCAAATGACAATCACTACTCACGCTCTAAGCATAAGTAG 1905 0.4703 MEETPSSVPATASCWSNVVKKQPPPPPQQHTERVLVETSDSPNAISVAVVDANAVIESGEKLHGLADKFISIPEVMEEIRDPVSRHKLSFLPFTIQTMEPSSESINKVVKFARATGDLQTLSDVDIKLIALTYTLEGQIHGTKHIRDAPPPVQMVNVKRLPEKDLPGWGSNVPNLDEWEALEHAEDASNSNSRILPLQDLSLNIVSQDEHSVDGSVEPVSEADLGIQEGGQNGLTKPRRYLPKKKEIKIEGKTMVADGIDASQGGVDDNAGDWMPAVSRSTHRRYLRRKARREYHESLSSNQDQQELEANVVDGSVGEDASALNPPVHQRDEEQHIENAVLEDGKVVKENKDNESIYEIMQQMRLEEGSLEVLDEESKPSSFPKELQSDNAGLVETASDGNATVVNKPCDSGTDTIDGQSNQLEIASQTSEVADFSCADDDDSDQSWVVRSLSESSVACITGDFAMQNVLLQMGLRLLAPGGTQIHQLHRWILKCHACYTVTGEIGRIFCPKCGNGGTLRKVAVTVNENGIVLAARRPRVTLRGTKFSLPLPQGGRDAVSKNLILREDQLPHRVLYPKTKKANKQDDDFFTPDSVFSHHTDKKAPFQPPVRKAMAVFGGRRNPNDNHYSRSKHK 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00126 634 CDD PIN_Nob1-like 49 160 IPR033411 -
Gma08g00126 634 PANTHER - 9 633 - -
Gma08g00126 634 Pfam PIN domain of ribonuclease 49 135 IPR033411 -
Gma08g00126 634 Pfam Nin one binding (NOB1) Zn-ribbon like 485 555 IPR014881 -
Gma08g00126 634 SUPERFAMILY NOB1 zinc finger-like 485 548 IPR036283 -
Gma08g00126 634 Gene3D - 479 553 IPR036283 -
Gma08g00126 634 MobiDBLite consensus disorder prediction 1 33 - -
Gma08g00126 634 Gene3D - 41 151 - -
Gma08g00126 634 MobiDBLite consensus disorder prediction 1 18 - -
Gma08g00126 634 PANTHER RNA-BINDING PROTEIN NOB1 9 633 IPR039907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00126 Gma-Chr8 1075053 1077720 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00126 K11883 - gmx:100785714 1241.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00126 08 1075053 1077720 Gma08g00126 08 1075053 1077720 ECH
Gma05g02021 05 41539128 41542142 Gma08g00126 08 1075053 1077720 GST