Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02021 ATGGAGGAAGCTCCGTCTTCAGTTCCGGCGACAGCATCGTGCTGGAGCAACGTGGTCAAGAAGCAACCACCACCACCACCACCGCAGCAGCACACTGAGCGAGTGTTGGTGGAAACCAGCGAATCCCCCAATGCCATCTCCGTCGCCGTCGTGGACGCCAACGCCGTCATCCAATCCGGCGAAAAGCTCCACGGCCTCGCCGACAAGTTCATCTCCATCCCCGAAGTCATGGAGGAAATCCGCGACCCCGTTTCGCGCCACAAACTCTCTTTCCTCCCCTTCACCATCCAAACCATGGAACCCTCCCCCGAATCCATCAACAAAGTTGTTAAATTTGCTAGGGCTACTGGGGACCTACAAACTCTTTCTGATGTTGATATCAAGCTCATAGCTCTGACTTATACTTTGGAGGCTCAAATTCATGGGACAAAACATCTCAGGGAAGCCCCTCCTCCCGTGCAAATGGTCAATGTAAAGAGGTTGCCTGAGAAGGACTTGCCCGGATGGGGTTCTAATGTCCCCAATTTGGATGAGTGGGAGGCATTGGAACAAACCGAGGACGTGTCCAATTCCAATTCCAGGATCCTTCCTTTGCAGGACCTGAGCTTGAACATTGTTTCTCATGATGAGCATTTTGTGGATGGTTCCGTGGAGCGTGCAAGTGAAGCTGATTCAGGGATTCAGGAGGGAGATCAGAATGGTTCGATGAAGCCTAGGAGATATCTGCCGAAGAAAAAGGAGATAAACATCGAGGGGAAGATGATGGTGGCTGATGGAATTGATGCGTCACAGGGAGAGGTTGATGATAGTGCTGGTGATTGGATGCCAGCTGTCAGTCGGAGTACTCATAGGAGATATCTAAGAAGGAAAGCTAGACGCGAGTATCATGAGTTGTTGTCAAGTAATCAAGATCAGCAACAGTTGGAAGGAAATGTTGATGGTAGTGTTGGTGAAGATGCTAGTGCTTTAAATCAGCCTGCTCATCACAATGAAGAACAACATATTGAAAATGCTGTGACAGAGGATGATAACGTGGTAAAAGAGAACAAAGACAATGAAAGTATCTATGAAATTATGCAGCAAATGAGGCTGCAAGAAGGTTCACTTGAAGTTCTTGATGAGGAAAGTAAACCAAGTTCATCTCCTGAAGAACTCCAGTCAGACAATGCTGGATTGGTGGAAACCGCATCTGATGGCAATGCAACTGTGGTTAATAAACTATGTGACAGTAGGACAGATACAATTGATGGCCAATCAAATCAACTGGAGATTGCAAGCCAGACAAGTGAAGCTGCTGATTTTTCATATGCAGATGATGATGATAGTGACCAAAGTTGGATGGTTAGGTCTTTGTCTGAATCAAGTGTAGCCTGTATAACTGGTGACTTTGCGATGCAAAATGTTCTTCTACAAATGGGTTTGCGCTTGCTGGCACCTGGAGGAACACAGATACACCAGCTGCACAGATGGATACTCAAGTGTCATGCCTGTAACACTGTTACTGCTGAGATTGGGAGGATTTTTTGTCCCAAATGTGGAAATGGTGGCACCTTAAGGAAGGTAGCAGTCACTGTTAATGAAAATGGAATAGTATTAGCTGCCCGTCGACCAAGAGTTACATTACGTGGCACAAAGTTTTCATTGCCTTTACCCCAAGGTGGGAGGGATGCAGTGACAAAGAACCTCATTCTCCGTGAAGATCAACTTCCTCAAAGGGTACTTTATCCTAAAATGAAGAAAGCCAATAAGCAGGATGATGACTTCTTTACACCAGACAGTGTCTTCAGCCACCACACAGACAAGAAAGCTCCTTTCCAGCCTCCTGTAAGGAAAGCAATGGCAGTTTTCAGTGGGAGGAGAAATCCAAATGACAATCACTACTCACGCTCTAAAGCATAA 1899 0.465 MEEAPSSVPATASCWSNVVKKQPPPPPPQQHTERVLVETSESPNAISVAVVDANAVIQSGEKLHGLADKFISIPEVMEEIRDPVSRHKLSFLPFTIQTMEPSPESINKVVKFARATGDLQTLSDVDIKLIALTYTLEAQIHGTKHLREAPPPVQMVNVKRLPEKDLPGWGSNVPNLDEWEALEQTEDVSNSNSRILPLQDLSLNIVSHDEHFVDGSVERASEADSGIQEGDQNGSMKPRRYLPKKKEINIEGKMMVADGIDASQGEVDDSAGDWMPAVSRSTHRRYLRRKARREYHELLSSNQDQQQLEGNVDGSVGEDASALNQPAHHNEEQHIENAVTEDDNVVKENKDNESIYEIMQQMRLQEGSLEVLDEESKPSSSPEELQSDNAGLVETASDGNATVVNKLCDSRTDTIDGQSNQLEIASQTSEAADFSYADDDDSDQSWMVRSLSESSVACITGDFAMQNVLLQMGLRLLAPGGTQIHQLHRWILKCHACNTVTAEIGRIFCPKCGNGGTLRKVAVTVNENGIVLAARRPRVTLRGTKFSLPLPQGGRDAVTKNLILREDQLPQRVLYPKMKKANKQDDDFFTPDSVFSHHTDKKAPFQPPVRKAMAVFSGRRNPNDNHYSRSKA 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02021 632 Gene3D - 41 155 - -
Gma05g02021 632 PANTHER RNA-BINDING PROTEIN NOB1 9 631 IPR039907 -
Gma05g02021 632 SUPERFAMILY NOB1 zinc finger-like 484 547 IPR036283 -
Gma05g02021 632 MobiDBLite consensus disorder prediction 1 32 - -
Gma05g02021 632 MobiDBLite consensus disorder prediction 298 342 - -
Gma05g02021 632 CDD PIN_Nob1-like 50 161 IPR033411 -
Gma05g02021 632 Pfam Nin one binding (NOB1) Zn-ribbon like 484 554 IPR014881 -
Gma05g02021 632 MobiDBLite consensus disorder prediction 218 239 - -
Gma05g02021 632 PANTHER - 9 631 - -
Gma05g02021 632 Gene3D - 478 552 IPR036283 -
Gma05g02021 632 Pfam PIN domain of ribonuclease 50 136 IPR033411 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02021 Gma-Chr5 41539128 41542142 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02021 K11883 - gmx:100800291 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02021 05 41539128 41542142 Gma05g02021 05 41539128 41542142 ECH
Gma05g02021 05 41539128 41542142 Gma08g00126 08 1075053 1077720 GST