Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00115 ATGGGTCGTTCATATTCATACAGGCAAATAAAAAGTGAAGAACTCCTATTGCCAAATAAAAATCCTTGCTGGTTGCTTCCATTCGCGATGGCGTTGCAGGAGAGGCTAGACAAGTTCAAGAAACAGCAAGAGAAGTGCCAAACGACACTTTCGACCATTGCAGCTACCAAGGCCGCCGCGGCAACCCAAAAGTCCGCCACACATGCCTCGGCAAATGGAAGAAACGCTGCCCCTGCGGTTAAGTTTTCCAACGACACCGAGAGGCTTCAGCATATTAATAGCATTCGCAAGGCCCCTGTGGGTGCTCAGATGAAGCGTGTTATTGATCTTCTTCTAGAGACACGACAAGCTTTTACACCGGAGCAGATAAATGAGGCATGCTATGTCGACATGAAGGCTAACAAAGATGTCTTTGAGAATCTGAGGAAAAACCCAAAAGTGAACTATGATGGGCAACGATTATCTTACAAGTCAAAGTATGGTATTAAGGACAAAACAGAGCTTCTTCAACTGGTACGAAAGTATCCCGAGGGCCTTGCTGTTATTGATCTCAAGGATGCTTACCCCACTGTGATGGAAGATTTGCAGGCTATGAAAGCTGCAGGGCAGATTTGGCTTCTGTCCAACTTCGATTCACAGGAAGACATTGCCTACCCTAACGACCCCAAAGTACACATTAAGGTGGATGATGACCTAAAACATCTTTTCCGCAGTATTGAATTGCCTCGTGATATGATTGATATAGAGAAGGATCTTCAAAAGAATGGAATGAAGCCCGCTACCAACACTGCACAGAGGAGGAGTGCAGCTCAAATTCAAGGCATTTCTTCCAAGCCAAAGCCTAAGAAGAAGAAGAGTGAAATCAGCAAGAGAACGAAGCTTACCAATGCTCATCTTCCAGAGCTCTTTCAGAATTTAAACAGTTCCTGA 930 0.4495 MGRSYSYRQIKSEELLLPNKNPCWLLPFAMALQERLDKFKKQQEKCQTTLSTIAATKAAAATQKSATHASANGRNAAPAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPEQINEACYVDMKANKDVFENLRKNPKVNYDGQRLSYKSKYGIKDKTELLQLVRKYPEGLAVIDLKDAYPTVMEDLQAMKAAGQIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKHLFRSIELPRDMIDIEKDLQKNGMKPATNTAQRRSAAQIQGISSKPKPKKKKSEISKRTKLTNAHLPELFQNLNSS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00115 309 MobiDBLite consensus disorder prediction 259 275 - -
Gma08g00115 309 Pfam TFA2 Winged helix domain 2 163 220 IPR040501 -
Gma08g00115 309 Coils Coil 29 49 - -
Gma08g00115 309 Pfam TFIIE beta subunit core domain 102 162 IPR003166 GO:0006367
Gma08g00115 309 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 30 308 IPR016656 GO:0005673|GO:0006367
Gma08g00115 309 MobiDBLite consensus disorder prediction 259 309 - -
Gma08g00115 309 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 88 163 IPR003166 GO:0006367
Gma08g00115 309 PANTHER BNAA02G21830D PROTEIN 30 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00115 Gma-Chr8 987867 991083 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00115 K03137 - gmx:100793998 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00115 08 987867 991083 Gma08g00115 08 987867 991083 ECH
Gma05g02011 05 41447207 41450011 Gma08g00115 08 987867 991083 GST
Gma01g02184 01 57110059 57113269 Gma08g00115 08 987867 991083 PCT
Gma11g00232 11 1813026 1816208 Gma08g00115 08 987867 991083 PCT