Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02011 ATGGCGTTGCAGGAGAAGCTAGACAAGTTCAAGAAGCAGCAAGAGAAGTGCCAAACGACACTTTCGAGCATTGCAGCTAGTAAGGCCGCGGCAACCCAAAAATCCGCCGCTCATGGCTCGGCCAATGGAAGAAACGCGGCCCCTGCGGTTAAGTTTTCGAACGACACAGAGAGGCTTCAGCATATTAATAGCATTCGCAAGGCCCCTGTGGGTGCTCAGATGAAGCGTGTTATTGATCTCCTTCTAGAGACACGACAAGCTTTTACACCAGAGCAGATAAATGGGGCATGCTATGTCGACATGAAGGCTAACAAAGATGTCTTTGAGAATCTGAGGAAAAACCCAAAAGTGAACTATGATGGGCAACGATTCTCTTACAAGTCAAAGTATGGTCTTAAGGACAAAACAGAGCTTCTTCAACTGATACGAAAGTATCCCGAGGGCCTCGCTGTTATTGACCTAAAGGATGCTTACCCCACCGTGATGGAAGATTTGCAGGCTTTGAAAGCTGCAGGGCAGATTTGGCTGCTATCCAACTTCGATTCACAGGAAGACATTGCCTACCCTAACGACCCCAAAGTGCACATTAAGGTGGATGATGACCTGAAACAGCTTTTCCGCAGTATTGAATTGCCTCGTGATATGATTGATATAGAAAAGGATCTTCAAAAGAATGGAATGAAGCCTGCTACCAACACTGCACAGAGGAGGAGTGCAGCTCAAATTCAAGGCATTTCTTCCAAGCCCAAGCCTAAGAAGAAGAAGAGTGAAATCAGCAAGAGAACGAAGCTTACCAATGCCCATCTTCCAGAGCTCTTTCAGACTTTAAACAGTTCCTGA 840 0.4631 MALQEKLDKFKKQQEKCQTTLSSIAASKAAATQKSAAHGSANGRNAAPAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPEQINGACYVDMKANKDVFENLRKNPKVNYDGQRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATNTAQRRSAAQIQGISSKPKPKKKKSEISKRTKLTNAHLPELFQTLNSS 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02011 279 Pfam TFA2 Winged helix domain 2 133 190 IPR040501 -
Gma05g02011 279 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 278 IPR016656 GO:0005673|GO:0006367
Gma05g02011 279 MobiDBLite consensus disorder prediction 226 245 - -
Gma05g02011 279 Pfam TFIIE beta subunit core domain 72 130 IPR003166 GO:0006367
Gma05g02011 279 MobiDBLite consensus disorder prediction 222 264 - -
Gma05g02011 279 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 58 133 IPR003166 GO:0006367
Gma05g02011 279 PANTHER BNAA02G21830D PROTEIN 1 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02011 Gma-Chr5 41447207 41450011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02011 K03137 - gmx:100802433 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02011 05 41447207 41450011 Gma08g00115 08 987867 991083 GST
Gma01g02184 01 57110059 57113269 Gma05g02011 05 41447207 41450011 PCT
Gma11g00232 11 1813026 1816208 Gma05g02011 05 41447207 41450011 PCT