Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00102 ATGGATCTTATTCATAAGTTCCTGAACATAGTAGCTCCTATAACCACCTTCTTTTTCCTTTGCCTTTTCTTACCACCGTATTGGACCTTCAAGTTCTTCCTTTCGATCATAAATTCCATCTTCAGTGAAAATGTTGCCGGTAAAGTTGTTCACATCACTGGTGCTTCCTCTGGCATTGGCGAGCATCTAGCATATGAGTATGGTAGAAGAGGAGCGCGTCTAGCACTTGTTGCCAGAAGAGAAAATAGACTCAAGGAGGTTGCTAGCATTGCCAAATTGTTTGGATCCCCTGAGGTCATCATCATCCCTGCAGATGTTTCAAGTTCCCAAGATTGCAAACGATTCGTTGACTCAACAATCAACCACTTTGGACAACTGGATCATCTGGTGAACAATGCAGGAGTAAGTGCTCCCGGCTTGTTTGAAAGCACCACTGATATCCGCAATTTTGCACCCGCAATGGACATTAACTTCTGGGGTTCTGCATATGGCACTTACTTTGCAATCCCCCACCTCAGAAAAAGCAAAGGCAAGATCATAGCAATAGCTTCCTGTACAGGATGGTTGCCTGTTCCAAGGATGAGCATCTACAATGCGAGCAAAGCAGCAGTGATCAGCTTATATGAGACTCTAAGAATTGAATTGGGAAGAGACATAGGGATAACTATAGTCACTCCAGGGCTGATTGAATCAGAAATGTCGCAAGGGAAGGTCTTATTCAAGGAAGGCAAGATGGTTTCTGATCAACTAATAAGAGATGTGCAAGCTAGTTTGATACCCATAAGATCAGTCACAGAAGCTGCCAAATCAATTGTTAATAGCGCTTGTCGCGGAGACTCATACTTGACAGAGCCAGCATGGTTTACGACAACGTTCTATTGGAAGATATTTTTCCCTGATGTGCTTGAGTTTTGTAACCGTAGGACCCTAATCTCAGGGTCTTCGGAGAGGGATACAGTTAGCAAGAAGCTCCTTGATTTATCAGGCTTGAAGAAATATCTGTGTCCCAAGTCAGTGAGAAATCCCAATCTCAAACCCAGCTAA 1044 0.4349 MDLIHKFLNIVAPITTFFFLCLFLPPYWTFKFFLSIINSIFSENVAGKVVHITGASSGIGEHLAYEYGRRGARLALVARRENRLKEVASIAKLFGSPEVIIIPADVSSSQDCKRFVDSTINHFGQLDHLVNNAGVSAPGLFESTTDIRNFAPAMDINFWGSAYGTYFAIPHLRKSKGKIIAIASCTGWLPVPRMSIYNASKAAVISLYETLRIELGRDIGITIVTPGLIESEMSQGKVLFKEGKMVSDQLIRDVQASLIPIRSVTEAAKSIVNSACRGDSYLTEPAWFTTTFYWKIFFPDVLEFCNRRTLISGSSERDTVSKKLLDLSGLKKYLCPKSVRNPNLKPS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00102 347 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 44 307 IPR036291 -
Gma08g00102 347 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 184 212 IPR020904 GO:0016491
Gma08g00102 347 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 135 IPR002347 -
Gma08g00102 347 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 197 216 IPR002347 -
Gma08g00102 347 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 185 IPR002347 -
Gma08g00102 347 PRINTS Glucose/ribitol dehydrogenase family signature 124 135 IPR002347 -
Gma08g00102 347 PRINTS Glucose/ribitol dehydrogenase family signature 171 187 IPR002347 -
Gma08g00102 347 PRINTS Glucose/ribitol dehydrogenase family signature 197 216 IPR002347 -
Gma08g00102 347 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Gma08g00102 347 PRINTS Glucose/ribitol dehydrogenase family signature 217 234 IPR002347 -
Gma08g00102 347 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE 1B-LIKE ISOFORM X1 1 339 - -
Gma08g00102 347 Pfam short chain dehydrogenase 48 236 IPR002347 -
Gma08g00102 347 Gene3D - 35 314 - -
Gma08g00102 347 PANTHER RETINOL DEHYDROGENASE-RELATED 1 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00102 Gma-Chr8 888812 891369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00102 43 234 Acyl Lipid Metabolism Gene Families AT1G24360 31.282 1.36e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00102 K22418 - gmx:100787835 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00102 08 888812 891369 Gma08g00102 08 888812 891369 ECH
Gma05g01994 05 41310722 41314440 Gma08g00102 08 888812 891369 GST