Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01994 ATGATTGAAATTAACAAGCTACTGAACTTTGCATTGCCCCCATTATCACTAATTGTCATCTTCATCTTCACGCCACCTTTGCTCTTAGTGAAGCTGCTTATGTATGTTAAAAAGTTTCTATACACCGAAAACGTGGCAGGGAAAGTAGTATTAATCACTGGAGCAGCCTCAGGGATTGGCGAGCAAGTAGCATATGAATATGCTAGGCGCGGAGCAAAGCTGTCTCTGGTTGACATTAGAAAGGACAAACTTGTAGCAGTGGCTGATAAGGCACGATCTTTGGGTAGCCCTGATGTTACCATCATTGGTGCAGATGTATCCAAGGTCCAAGACTGTAACCGCTTTGTTGATGAAACGGTGAACCACTTTGGAAGACTGGACCATCTGGTAAATAACGCTGGAATTAGTCGTAAGTCTGTAGGGGTGGAGGATTGGCTTGATGTTTCCGAATTCACTCCGATTATGGACATTAACTTTTGGGGAGCAGTTTATGGCACTTTATATGCAATCCCACATCTCAAAATAAACAAGGGTAGGATCATAGTGATTGCTTCAGGTTGCGGATGGTTCCCACTACCAAGGATAAGTATCTATAATGCGAGCAAGGCAGCGGTAATAAACTTCTTTGAGACTCTGAGAATGGAACTTGGTTGGGATATTGGCATAACTATCGCCACACCCGGTTTTGTCAAAACGGACCTTACATTGAGGGCAATGGAATTTGAGCCTACGGTGGGAAGAATTCCAATGGGGTCAGCATGTGAATGTGCTATAGCCATTGTGGACAGTGCATGCAGGGGAGATATGTACGTCACAAATCCATCGTGGGTCAAAGTGTTGCTTCCTTGGAAGTTGCTTTGTCCTGAACTTGTGGACTGGGCCTGTTGCTTGGTCTTTGGGGTTTCTCAAAACTCGTCTAGCATGAAAGGCAATCTGCATGTGTCCAGGATCCCAGAGCTTAAGTTAGAATAA 972 0.4444 MIEINKLLNFALPPLSLIVIFIFTPPLLLVKLLMYVKKFLYTENVAGKVVLITGAASGIGEQVAYEYARRGAKLSLVDIRKDKLVAVADKARSLGSPDVTIIGADVSKVQDCNRFVDETVNHFGRLDHLVNNAGISRKSVGVEDWLDVSEFTPIMDINFWGAVYGTLYAIPHLKINKGRIIVIASGCGWFPLPRISIYNASKAAVINFFETLRMELGWDIGITIATPGFVKTDLTLRAMEFEPTVGRIPMGSACECAIAIVDSACRGDMYVTNPSWVKVLLPWKLLCPELVDWACCLVFGVSQNSSSMKGNLHVSRIPELKLE 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01994 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 42 298 IPR036291 -
Gma05g01994 323 PRINTS Glucose/ribitol dehydrogenase family signature 172 188 IPR002347 -
Gma05g01994 323 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Gma05g01994 323 PRINTS Glucose/ribitol dehydrogenase family signature 124 135 IPR002347 -
Gma05g01994 323 PRINTS Glucose/ribitol dehydrogenase family signature 218 235 IPR002347 -
Gma05g01994 323 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Gma05g01994 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 178 186 IPR002347 -
Gma05g01994 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 198 217 IPR002347 -
Gma05g01994 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 135 IPR002347 -
Gma05g01994 323 Gene3D - 34 304 - -
Gma05g01994 323 PANTHER RETINOL DEHYDROGENASE-RELATED 1 301 - -
Gma05g01994 323 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 185 213 IPR020904 GO:0016491
Gma05g01994 323 Pfam short chain dehydrogenase 48 235 IPR002347 -
Gma05g01994 323 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE-LIKE 6 1 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01994 Gma-Chr5 41310722 41314440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01994 43 251 Acyl Lipid Metabolism Gene Families AT1G24360 30.841 3.57e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01994 K22418 - gmx:100808990 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01994 05 41310722 41314440 Gma05g01994 05 41310722 41314440 ECH
Gma05g01994 05 41310722 41314440 Gma08g00102 08 888812 891369 GST