LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma08g00100	ATGCCTTCCGAAACCCTAGAAAACCAGAAACCTCAAGTGGAAGACCAACAAGACCTAGCTGAAGACAGCCACACAGAGCAAGAAGATAATTCGGAGATGAAGGAGATTGATGGCAAAGGCGAAGAAGAGAAGGAGAAAGAGGAAGAGGTAGAAGGCGATGAAGAAAATGAGGAGAAGGAGGAACGTGACGAGCTGAAGTCAAAAAAGTCAACGAAAGAAAGCGCTTTCGCTACTCCAGGAAGTGAGAGACCAACTAGGGAGAGGAAAACGGTGGAGAGGTACACTGTTTCTTCGCCCGACAAGTTTCCCAGATCTTCTTCCATCAAAGCTCTCTCAATTGAAAAGGGCAGCGGTACACAGCTCATGGACATTCCTAATGTGGCTTTCACGTTATCAAAGAGAAAAGCTGATGACAACTTGCGTGCACTTCATAGTATATTGTTTGGGAAAAAAGCAAAGGCACACCATCTAAAGAGAAATATAGGATTGTTTTCTGGCTATGTGTGGACTGAAAATGAGgaaaaacagagggcaaagataagggagaagattgacaaatgtgtgaaagaaaagttggtggacttctgtaatgtgcttaatattccgataactaagaccagtatgaagaaggaggaactgtctgcaaagttgttagaatttttggagtccccacatgctacaactgatgttctgcttgctgataaggaaaagAAAGGCAAAAAGCGAGCCAGAAAGCAAACCCCAAGCAAATCCCCTGCTAAGAAGCAAAAGCAAAATTCACAAGTTGGGAAAAAGCAAAAGCAATCTTCTGACATCGAGGACAGTGATGCAGCTGAACCTTCAGATGCAAAAGTTGATTCCCGGGAAGATGATGATTCAAGTCAAAAAAGTGAAGGTGGTAATAAGGAAAGCATATCAGAGAAAGAGGAAGATAAAGAAAAGGTTCACAAACGTTCTTCAAAAAAGATTCTGAAGGAGGATCAAACCACACCTGTAAAGAAGACCACTGGTGTAAAGACTGCCAAGAGCAATGAAAACACTTCTAAAAAATCTACTTCAAAAAGGGCTGTTACTGACAGTACTTCTAAGTCCAAGAAACAGAAATCAGTGAAGGAAAACCTGAACTCGAAAAGGAAGGATGCAAACAAAAAACAAACTGACAAGTCTTTGAAGGCTTTATTGAAGGATCAAGGCAAAGATAAAAGTAGTGAGAAGGCCAAAGCAGAACCTAGTAAGGAGGAGTTGCATCGAGTGGCTGTTGATATTTTGAAGGAAGTAGATTTCAATAAGGCAACTTTATCTGACATCCTCAGGCAACTTGGTACTCACTTTGACGTGGATTTAATGCCTAGAAAAGCAGAGGTGAAGGATATAATTACAGATGTAATTAATAACATGTCTGATGATGATAGAGAGGAAGCTGAAAATGTTGGGGATGATGATGCAGATGAAGATGATGCTTGA	1464	0.3586	MPSETLENQKPQVEDQQDLAEDSHTEQEDNSEMKEIDGKGEEEKEKEEEVEGDEENEEKEERDELKSKKSTKESAFATPGSERPTRERKTVERYTVSSPDKFPRSSSIKALSIEKGSGTQLMDIPNVAFTLSKRKADDNLRALHSILFGKKAKAHHLKRNIGLFSGYVWTENEEKQRAKIREKIDKCVKEKLVDFCNVLNIPITKTSMKKEELSAKLLEFLESPHATTDVLLADKEKKGKKRARKQTPSKSPAKKQKQNSQVGKKQKQSSDIEDSDAAEPSDAKVDSREDDDSSQKSEGGNKESISEKEEDKEKVHKRSSKKILKEDQTTPVKKTTGVKTAKSNENTSKKSTSKRAVTDSTSKSKKQKSVKENLNSKRKDANKKQTDKSLKALLKDQGKDKSSEKAKAEPSKEELHRVAVDILKEVDFNKATLSDILRQLGTHFDVDLMPRKAEVKDIITDVINNMSDDDREEAENVGDDDADEDDA	487

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma08g00100	487	PANTHER	DEK PROTEIN	3	486	IPR044198	GO:0003677\|GO:0006325
	Gma08g00100	487	MobiDBLite	consensus disorder prediction	472	487	-	-
	Gma08g00100	487	Coils	Coil	170	190	-	-
	Gma08g00100	487	MobiDBLite	consensus disorder prediction	330	358	-	-
	Gma08g00100	487	MobiDBLite	consensus disorder prediction	231	415	-	-
	Gma08g00100	487	Pfam	DEK C terminal domain	410	462	IPR014876	-
	Gma08g00100	487	MobiDBLite	consensus disorder prediction	464	487	-	-
	Gma08g00100	487	MobiDBLite	consensus disorder prediction	359	415	-	-
	Gma08g00100	487	MobiDBLite	consensus disorder prediction	14	45	-	-
	Gma08g00100	487	Coils	Coil	43	63	-	-
	Gma08g00100	487	MobiDBLite	consensus disorder prediction	252	266	-	-
	Gma08g00100	487	Gene3D	-	401	465	-	-
	Gma08g00100	487	PANTHER	OS01G0924900 PROTEIN	3	486	-	-
	Gma08g00100	487	SUPERFAMILY	DEK C-terminal domain	403	464	-	-
	Gma08g00100	487	MobiDBLite	consensus disorder prediction	1	108	-	-
	Gma08g00100	487	MobiDBLite	consensus disorder prediction	267	329	-	-
	Gma08g00100	487	MobiDBLite	consensus disorder prediction	46	60	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma08g00100	Gma-Chr8	878118	884020	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma08g00100	K17046		-	gmx:100779284	792.727

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma08g00100	08	878118	884020	Gma08g00100	08	878118	884020	ECH
	Gma05g01993	05	41298297	41305667	Gma08g00100	08	878118	884020	GST