Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01993 ATGTCGCAAGGGAAGGTCCTATCCATGGAAGGCAAGATGGTTTTTGATCAACTAATAAGAGATGTAAGCTATCTTTACTTTTTGCACAAAACTTGGACGCAATTTTTAACATATCTTTTGTTCTCAACCATGTCTTCCGGAACCCTAGAAAACGAGAAACCTCAAGTGGAAGAAGAACAAGCCCAAGCTGAAGACAACCACACCAAGCAAGAAGATAATTCGGAGATGAAAGACGACGATGACAGAGGCGAAGAGGAAAGGGATCAGGTAGAACAAGAAAAGGATGTGGAGAAAGAGGAAGAAAAAGAAGAAGAAGAAGAAGAGAAGGAGGAGGACCGTGACGAGGTGAAGTCAAAAAAGTCAACGAAAGAAAGCGGTTACGCTACTCCAGGAAGTGAGAGACCAACTAGGGAGAGGAAAACGGTGGAGAGGTACACTGTTTCTTCGCCCGACAAGTTTCCCAGATCTTCTTCCATCAAAGCTCTGTCAATTGAAAAGGGCAACGGTACGCAGCTCAAGGACATTCCTAATGTGGCTTTCAAGTTATCAAAGAGAAAAGCTGATGACAACCTGCATGCACTTCATAGTATATTGTTTGGGAAAAAAGCAAAGGTACATCATCTAAAGAGAAATATAGGTCTGTTTTCTGGCTATGTGTGGACTGAGAATGAGGAAAAACAGAGGGTGAAGATAAAGGAGAAGATTGACAAATGTGTGAAAGAAAAGTTGGTGGACTTCTGTAATGTGCTTAATATTCCGATAAATAAGACCAGTAAGAAGAAGGAGGAACTGTCTGCAAAGTTGTTGCAATTTTTGGAGTCCCCACATGCTACAACTGATGTTCTGCTTGCTGATAAGGAAAAGAAAGGCAAAAAGCGAGCCAGAAAGCAAACCCCAAGCAAATCTTCTGGGGAAGGATCCAAAACATCTGCCAAGAAGCAAAAGCAAAATTCACAAGTTGGGAAAAACCAAAAGCAGTCTTCTGACATTGAGGACAGTGATGCAGCTGAACCTTCAGATGCAAAAGTTGATTCTCAGGAAGATGATGATTCAAGTCAAAAAAGTGAAAGTGATAATGAGGAAAGCATATCAGAGAAAGAGGAAGATAAAGAAAAGGCTCACAAACGTACTTCAAAAAAGATTCTGAAGGAGGATCAAACCACACCTGTAAAGAAGACCACTGTTGTAAAGACTGCCAAGAGCAATGAAAGAGCTCCTGAAAAATCTTCTTCAAAAAGGGCTGTTACTGACAGTACTTCTAAGTCCAAGCAATCTGCTTCCAAGAAACAGAAAACAATGAAGGAAAACCAGAACTCTATAGGGAAGGATGCAAACCAAAAACAAGCTGACAAGTCTTCGAAGGCTTTAGTGAAGGATCAAGGCAAAGGTAAAAGTAGTGAGAAGGCAAAAGCAGAACCTAGTAAGGTGGAGATGCATCGAGTGGCTGTTGATATTTTGAAGGAAGTAGATTTCAATAAGGCAACTTTATCTGATATCCTCAGGCAACTTGGTACTCACTTTGATGTGGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATAATTACAGATGTAATTAATAACATGTCTGATGACGATGGAGAGGAAGCAGAAAATGTTGGGGATGATGATGAAGATGATGCATGA 1647 0.4062 MSQGKVLSMEGKMVFDQLIRDVSYLYFLHKTWTQFLTYLLFSTMSSGTLENEKPQVEEEQAQAEDNHTKQEDNSEMKDDDDRGEEERDQVEQEKDVEKEEEKEEEEEEKEEDRDEVKSKKSTKESGYATPGSERPTRERKTVERYTVSSPDKFPRSSSIKALSIEKGNGTQLKDIPNVAFKLSKRKADDNLHALHSILFGKKAKVHHLKRNIGLFSGYVWTENEEKQRVKIKEKIDKCVKEKLVDFCNVLNIPINKTSKKKEELSAKLLQFLESPHATTDVLLADKEKKGKKRARKQTPSKSSGEGSKTSAKKQKQNSQVGKNQKQSSDIEDSDAAEPSDAKVDSQEDDDSSQKSESDNEESISEKEEDKEKAHKRTSKKILKEDQTTPVKKTTVVKTAKSNERAPEKSSSKRAVTDSTSKSKQSASKKQKTMKENQNSIGKDANQKQADKSSKALVKDQGKGKSSEKAKAEPSKVEMHRVAVDILKEVDFNKATLSDILRQLGTHFDVDLMHRKAEVKDIITDVINNMSDDDGEEAENVGDDDEDDA 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01993 548 MobiDBLite consensus disorder prediction 97 111 - -
Gma05g01993 548 PANTHER OS01G0924900 PROTEIN 47 547 - -
Gma05g01993 548 Pfam DEK C terminal domain 484 525 IPR014876 -
Gma05g01993 548 MobiDBLite consensus disorder prediction 52 76 - -
Gma05g01993 548 Gene3D - 465 528 - -
Gma05g01993 548 MobiDBLite consensus disorder prediction 50 164 - -
Gma05g01993 548 MobiDBLite consensus disorder prediction 282 477 - -
Gma05g01993 548 MobiDBLite consensus disorder prediction 327 387 - -
Gma05g01993 548 SUPERFAMILY DEK C-terminal domain 467 527 - -
Gma05g01993 548 Coils Coil 46 122 - -
Gma05g01993 548 MobiDBLite consensus disorder prediction 529 548 - -
Gma05g01993 548 MobiDBLite consensus disorder prediction 397 411 - -
Gma05g01993 548 MobiDBLite consensus disorder prediction 447 477 - -
Gma05g01993 548 PANTHER DEK PROTEIN 47 547 IPR044198 GO:0003677|GO:0006325
Gma05g01993 548 MobiDBLite consensus disorder prediction 412 446 - -
Gma05g01993 548 MobiDBLite consensus disorder prediction 150 164 - -
Gma05g01993 548 MobiDBLite consensus disorder prediction 300 326 - -
Gma05g01993 548 MobiDBLite consensus disorder prediction 527 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01993 Gma-Chr5 41298297 41305667 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01993 K17046 - gmx:100785644 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01993 05 41298297 41305667 Gma05g01993 05 41298297 41305667 ECH
Gma05g01993 05 41298297 41305667 Gma08g00100 08 878118 884020 GST