Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00096 ATGCCGGAAGAGGATTTGGTGGACATCAAATTTAGGTTGTACGATGGTTCTGATATCGGACCCTTCAGGTACTCCTCCGCTGCCACCGTCGATATGCTTAAGCAAAGGATTGTCTCCGATTGGCCCAAAGGTAAAACCGTCGTGCCAAAGTCAGCTAATGAAGTGAAATTGATTAGTTCTGGTAAAATCTTGGAAAACAATAAGACTGTTGGTCAATGTAAAGTACCATTTGGTGAGACTCCAGGGGGTGTTATAATAATGCTTGTTGTTGTACAGCCATCTCTAGCAAAAACTAAAGCTGATAAGAAGGTTGATGATTCGCCAAAGAAGCATTCCTGTGTAAATTTATCATGGACATGGATAATTCACCAACAACTCTGTTTCCTGGTTAAACGTATTTCAACTTGTCCAAGTTTGTTAACCGCAAAGTAG 432 0.4097 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPKGKTVVPKSANEVKLISSGKILENNKTVGQCKVPFGETPGGVIIMLVVVQPSLAKTKADKKVDDSPKKHSCVNLSWTWIIHQQLCFLVKRISTCPSLLTAK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00096 143 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3 1 114 - -
Gma08g00096 143 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 114 IPR040015 -
Gma08g00096 143 CDD Ubl_MUBs_plant 6 93 - -
Gma08g00096 143 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 114 IPR039540 -
Gma08g00096 143 Gene3D - 1 100 - -
Gma08g00096 143 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Gma08g00096 143 SUPERFAMILY Ubiquitin-like 2 97 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00096 Gma-Chr8 820461 829552 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00096 - - gmx:100500090 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00096 08 820461 829552 Gma08g00096 08 820461 829552 ECH
Gma05g01990 05 41252614 41257231 Gma08g00096 08 820461 829552 GST